Pseudescherichia vulneris: LMA04_11890
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Entry
LMA04_11890 CDS
T08658
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00541
Biosynthesis of various nucleotide sugars
pvj01100
Metabolic pathways
pvj01250
Biosynthesis of nucleotide sugars
Module
pvj_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LMA04_11890 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvj01005
]
LMA04_11890 (rfaD)
Enzymes [BR:
pvj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LMA04_11890 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pvj01005
]
Core region
LMA04_11890 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Ldh_1_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
WAH50853
LinkDB
All DBs
Position
2462285..2463217
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLADLNIADYMDKEDFLIQV
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERDIPFLYASSAATY
GGRTSNFIESREYEQPLNVYGYSKFLFDEYVRQILPEANSPIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGETPKLFEGSDGFKRDFVYVGDVAAVNLWFWENRVSGIYNLGTGRA
ESFQAVADAALAFHKKGEIEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttaccggcggcgcaggctttatcggcagcaacattgtcaaagcgcttaat
gacaaaggcatcaccgacattctggtggtcgataacctgaaagatggcaccaagttcgtt
aacctggccgatctgaacatcgctgattacatggataaagaggatttcctcatccaggtc
atggcgggggaagagttcggcgacgtcgaagccatcttccacgaaggcgcatgctcctcc
accaccgagtgggacggcaagtacatgatggacaacaactatcagtactccaaagagctg
ctgcactactgcctggagcgcgatatcccgttcctgtacgcctcctctgcggccacctac
ggcggacgcaccagcaactttatcgaatcccgcgagtatgagcagccgctgaacgtctac
ggctactctaagttcctgtttgatgagtacgtgcgccagatcctgccagaagcgaactcg
ccgatcgtcggtttccgctacttcaacgtctacggcccgcgtgaaggccacaaaggcagc
atggccagcgttgctttccacctcaacacccagctgaacaacggcgaaacgccgaagctg
tttgaaggcagcgacggcttcaagcgcgacttcgtctacgtgggcgacgtggcggcagtg
aacctctggttctgggaaaaccgcgtctccggtatctacaacctcggcaccggccgcgct
gagtccttccaggccgtggccgacgccgcgctggcgttccacaagaagggcgagatcgag
tacatcccgttcccggagaagctgaaaggccgctaccaggcgttcacccaggcggatctg
accaatctgcgtgcggcaggctacgacaagccatttaaaaccgttgccgaaggcgtagcg
gagtatatggcctggctgaaccgcgacgcgtaa
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