Pseudescherichia vulneris: LMA04_11940
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Entry
LMA04_11940 CDS
T08658
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00540
Lipopolysaccharide biosynthesis
pvj01100
Metabolic pathways
Module
pvj_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LMA04_11940 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvj01005
]
LMA04_11940 (waaA)
Enzymes [BR:
pvj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LMA04_11940 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LMA04_11940 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
LMA04_11940 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
LMA04_11940 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
pvj01005
]
Lipid A
LMA04_11940 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Glyco_trans_4_4
T2SSK
Motif
Other DBs
NCBI-ProteinID:
WAH50863
LinkDB
All DBs
Position
2472835..2474112
Genome browser
AA seq
425 aa
AA seq
DB search
MLQLLYTTLFYLIQPIIWLRLWVRGRKAPAYRKRWGERYGFYKKPLKPGGILMHSVSVGE
TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVLSAFGNDVQHVYLPYDLPDALNRFLNA
VDPKLVLVMETELWPNLIAALHKRQIPLVIANARLSARSAKGYAKLGDFIRTLLRRITLI
AAQNEEDGERFIALGAKRNQLTVTGSLKFDISVTPQLASRAVTLRRQWAPHRPVWIATST
HEGEESIVIEAHQALLREFPNLLLILVPRHPERFPDAINLVRQAGLSYITRSSGEVPSSS
TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
RLSQADGLITVADVASLSKEVASLLTDEDYRNFYGRHAVEVLYQNQGALQRLLQLLEPYL
PPKAH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaattgctttacaccactcttttctacctgattcagccgattatctggctgcgt
ctctgggtgcgtggtcgcaaagcaccggcctaccgcaaacgttggggcgagcgttacggc
ttctataagaaaccacttaagcccggcggcattctgatgcactccgtttccgtgggcgaa
accctggcggccattccgctggttcgcgccctgcgccaccgctatcccgatctgccgatt
accgtcactacgatgaccccgaccgggtcggagcgcgtgctctctgcttttggcaacgac
gtgcagcacgtctacctgccctacgatctgccggacgcgcttaatcgctttcttaacgcc
gtggatccgaagctggtgctggtgatggagaccgaactatggcctaacctgatcgccgct
ctgcacaaacgccagatcccgctggtgatcgccaacgcccgtctctccgcgcgctccgct
aaaggctatgcaaagctgggcgattttattcgcactctgctgcgccgaatcacgctcatt
gctgcccagaacgaagaggatggcgagcgctttattgcccttggggcaaagcgtaaccag
ctcaccgtcaccggcagcctgaaatttgatatctccgtgacgccacagcttgcttcccgg
gcagtgacgctgcgccgccagtgggcgccgcaccgccccgtctggatcgccaccagcacc
cacgagggtgaagagagcattgttatcgaggcgcaccaggcacttttgcgcgaatttcct
aacctgctgctgattctggttccgcgccatccggaacgcttcccggacgccatcaacctg
gtgcgccaggcgggcctgagctacatcacccgctcatccggcgaggtcccctccagcagt
actcaggtcgtggtgggcgatactatgggcgagctgatgctgctctacggcattgccgat
ctcgcctttgttggtggctcactggtagaacgcggcgggcataatccgctggaagccgct
gcgcacgctattccggtgctgatggggccgcatacgtttaactttaaagatatctgcgcc
cgtctgagccaggcagatggtttgatcaccgttgcggacgtcgcctcgctgagcaaagag
gttgcctccctgttgaccgatgaggactaccgcaacttttacggtcgccatgcggtagag
gtgctctatcaaaaccagggcgcgctacagcgtctgttacaattgctggaaccctatctg
ccaccaaaagcccattaa
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