Pseudescherichia vulneris: LMA04_11950
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Entry
LMA04_11950 CDS
T08658
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMA04_11950 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_11950 (mutM)
Enzymes [BR:
pvj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LMA04_11950 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMA04_11950 (mutM)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMA04_11950 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WAH50865
LinkDB
All DBs
Position
complement(2474651..2475460)
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGQTILHAVVRNGRLRWPVSDEIHRLSDKPVLSVQRRAKYLL
LELPDGWIIVHLGMSGSLRILPHDLPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDAFNAEYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSHEECALLVQVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQQLQVYGRK
GEPCRVCATPIVATKHAQRATFYCRNCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtagaaaccagccgccgcggtatagagccgcacctggtgggt
caaactatcctgcacgcggtggtacgcaatggccgcctgcgctggcccgtttccgacgaa
atccaccgcctgagcgataaaccggtgctgagcgtgcagcggcgggcaaaatacctgctg
ctggagctgcccgatggctggatcattgtccatctcggcatgtccggtagcctgcgcatc
ctgccgcacgatcttcctgccgagaagcacgatcatgtcgatctggtgatgagcaacggc
aaagtgctgcgctacaccgatccgcgccgctttggtgcctggctgtggaccaaagagctg
gaggggcataacgtgctggcgcacctggggccggagccgctcagcgatgcgttcaatgca
gagtatctgcagcagaagtgcgcgaaaaagaaaaccgccattaaaccctggctgatggat
aacaagctggtggtgggggtgggcaatatctacgccagtgaatcgctgttcgccgccggg
atccacccggaccgactcgcctcgtcgctctctcatgaagagtgtgctctgctggtgcag
gtcattaaagcggtgctgctgcgctcgatagagcagggcgggacaacgttaaaagacttt
ctgcaaagcgacgggaagccaggctatttcgcccagcagctgcaggtttacggacgcaaa
ggcgaaccctgccgcgtctgcgcgacgccaatcgtggcaactaagcacgcccagcgcgct
accttctactgccgcaactgccagaagtag
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