Pseudescherichia vulneris: LMA04_12085
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Entry
LMA04_12085 CDS
T08658
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00630
Glyoxylate and dicarboxylate metabolism
pvj00680
Methane metabolism
pvj01100
Metabolic pathways
pvj01120
Microbial metabolism in diverse environments
pvj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMA04_12085 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LMA04_12085 (fdhF)
Enzymes [BR:
pvj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LMA04_12085 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_6
Fer4_7
Fer4_21
Fer4_9
Fer4_8
Fer4_2
Fer4_10
Fer4_16
Fer4_18
Fer4_4
Fer4_15
APH
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WAH50888
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All DBs
Position
2503173..2506145
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AA seq
990 aa
AA seq
DB search
MSEPLCTLFYNGRPVTGPANVPLIDFLTAGGLKLPHVCYHPSLEPMQTCDVCWVEYNGEL
VRGCTLKSAEGMEIASRTPLAEAAQHEGMDRLLAKHELYCTVCEHNTGDCTLHNTMADMH
IPIQRYEYQRKPYVKDHSNPFYTYDPDQCILCGRCVEACQNVEVNETLSIDYTMAHPRVL
WDGGETIAGSSCVSCGHCVTVCPCNALLEKTMQPDAGPFTSMKQSLKRPMIDLVKAVENS
TGAEIVTGISVMDMHWRQPEIKRTKTVCTYCGVGCSFEMWTRDRHVLKVQPVADAPANGI
STCVKGKFAWDFINDKERLTTPLIRENDRFRKASWDEALALVARRLLQIRDQYGPQSIGF
IGSSKASNEEAYLTQKIARLIIGTNSVDNSSRYCQNPATKGLFRTVGYGGDAGTIEDLHK
AELVVIVGSNTAENHPVIAAKLKAAKKHHGQKLLVVDPRRHEMAERADRYLRIRPSTDMV
WASAMARYMFDNGYADEAFLANHVNQVEEYRQSLAPFTLEFAAQTTGLTVEELTAAAELI
GNAGSVCIVWAMGITQHSHGADTSTALSNLLLVTGNYGRPGTGGYPMRGHNNVQGASDFG
CLKNYYPGYESVSDESVRAKWAKAWGVEPKKLSLEVGSDNFEMVEHARTKQVRAMYVIGE
ETAFSDADTTNVHEGFTNLDFLVVQDLFLSRTAQFADVVLPGCPSVEKEGTFVNTERRIQ
RFYEAMAPLGDSRPDWRILTELAARMGHDWGYTHPSQIMAEAASIATIFAGVSYERLEGW
NSQLWPVKPDGESTPLLYTDGFKFPDKRAVLYPLEWQPPAEAPDDEYDLALNNGRMLEHF
QSTNQSGRGGRTMSLSPDWFVEISPELAAERGLEEGDWVKLISRRGELEVPVVVTDRVAG
GSLFISIHQGKPGINQLTGEHHDPDVNTPAYKELAVKLKKLSREPHPSPLPRHNFRYGKR
TPITHVPVEEKWQRDDYRLPPEQEPHPEKF
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccctgtgtaccctgttttacaacgggaggccggttactggcccagcgaac
gtcccgttaatcgattttcttaccgcgggcggcctgaaactgccccatgtctgctaccac
ccctctcttgaacccatgcaaacctgcgacgtttgctgggtggaatacaatggcgaactg
gtgcgcggctgcacgctcaaaagcgcggaaggcatggagatagcgagccgcacgccgctt
gccgaggcggcgcagcatgaaggcatggaccgcctgctggcgaagcatgagctctactgt
accgtctgcgagcacaacaccggcgactgcaccctgcacaatacaatggcagacatgcat
atccccattcagcgctatgaataccagcgcaaaccctacgtgaaagaccactccaacccg
ttctacacctacgaccccgatcagtgcattctctgcggccgctgcgtagaggcgtgccag
aacgtggaagtgaatgaaacgctaagcatcgactacacgatggcacacccgcgcgtgctg
tgggatggcggcgaaaccattgccggctcaagctgcgtcagctgcggccactgcgtcacc
gtctgcccctgtaacgcgctgcttgagaaaaccatgcagccagacgccgggccgttcacc
agcatgaaacagtcgcttaagcggcccatgatcgatctggtgaaggcggtagaaaatagc
accggcgcggaaatcgtcaccggtatttcagtgatggatatgcactggcgccagccggag
atcaagcgcactaaaaccgtctgcacctattgcggcgtggggtgcagctttgagatgtgg
acgcgcgaccgccacgtgctgaaagtgcagccggtggccgatgcccctgccaacggcatc
tccacctgcgtgaaaggtaaattcgcctgggattttattaacgataaagagcgccttacc
acaccgctgattcgtgaaaatgaccgctttcgcaaagcgagctgggatgaagccctggcg
ctggtggcgcgccgcctgctgcaaatccgcgaccagtacggcccacagagtatcggcttt
atcggctccagcaaggcgagcaatgaagaggcctacctgacgcagaaaattgcccgcctg
attatcggcaccaacagcgtggataactcctcgcgctactgccagaacccagccaccaaa
ggcttattccgtaccgtaggctacggcggcgacgcgggcactattgaagacctgcataag
gcggagctggtggtcatcgtcggcagcaacaccgctgaaaaccacccggttatcgcagca
aagcttaaagcagcgaaaaagcatcacggccagaaattgctggtggtggacccgcgccgt
cacgagatggccgaacgtgccgatcgctatttacgcattcgccccagcaccgacatggtc
tgggcctcggcgatggcacgctacatgttcgataacggctatgccgatgaagccttcctg
gcgaaccacgttaaccaagtggaagagtatcgccagtcgctggcaccttttacgctggag
tttgcggcccaaaccacaggcctgacggtggaggagttgaccgccgctgccgaacttatc
ggcaatgcgggctctgtctgcatcgtctgggcgatgggtatcacccagcacagccacggc
gcggacaccagcacggcgctctcgaacctgctgctggtcaccggtaactatggccgcccc
ggcaccggcggctacccgatgcgcggccacaacaacgtgcagggcgcgagcgatttcggc
tgcctgaaaaactactatccgggctatgagtcggtaagcgatgaaagcgtgcgggccaaa
tgggcgaaggcctggggcgtggagccgaaaaaactctcgctggaggtcgggtcagacaac
tttgagatggttgagcatgcacgtacgaaacaggtgcgcgctatgtacgttatcggtgaa
gagacagcattttcagacgccgacaccaccaacgtgcacgaaggcttcaccaatcttgat
ttcctggtggtgcaggatctctttttaagccgcaccgcgcagttcgccgacgtggtactg
cccggttgcccaagcgtggaaaaagagggtaccttcgtcaacaccgagcggcgcatccag
cgcttttacgaggcgatggcaccgctgggcgacagccgcccggactggcgcatccttacc
gagctggccgcccgcatgggccatgactggggctacacccatccttcacaaatcatggcg
gaggcggcgagcatcgctaccattttcgctggcgtcagctacgagcggctggaggggtgg
aattcgcagctctggccggtgaagcccgatggtgagagcacgccgctgctgtataccgat
ggcttcaaattccccgacaaacgcgccgtgctttacccgcttgagtggcagccgcctgcc
gaagcgccagatgacgagtacgatctggcgcttaacaacggacggatgctggagcatttc
cagtccaccaaccagagcgggcgtggcggacgtacgatgtcgctctcgccggactggttt
gtagagattagccctgagcttgccgccgaacgcggccttgaagagggagactgggtgaag
ctcatctcaaggcgcggtgagctggaggtgcccgtggtcgtcaccgaccgcgtggcaggc
ggctcgctctttatctccattcaccagggcaagccgggcattaaccagctgacgggcgag
catcacgatccggacgtaaacaccccggcatacaaagagctggcggtgaaacttaagaaa
ctttcccgcgagccgcacccctcacccctgccccggcacaacttccgctacggcaaacgc
accccgattacccatgtgccagtcgaggagaaatggcagcgcgacgactatcgcctgccg
cctgaacaggaaccgcatccggagaaattttaa
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