Pseudescherichia vulneris: LMA04_12780
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Entry
LMA04_12780 CDS
T08658
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LMA04_12780 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvj02000
]
LMA04_12780 (rhaS)
Transporters [BR:
pvj02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
LMA04_12780 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
AGT
Motif
Other DBs
NCBI-ProteinID:
WAH51016
LinkDB
All DBs
Position
complement(2650349..2651335)
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AA seq
328 aa
AA seq
DB search
MRIKTSLILTVAALALSGSALAEVKIALVAKSLGNGFFEAANVGAQEAAKELGDVKVIYT
GPTTTTAEAQIEVLNGLIAQGVDAIAISANDPDAVVPVLKKAMQRGIKVVSWDSGVAKAG
RQIHLNPSNNALIGETNVKLAAEALKALNVEKGDVAILSATPTSTNQNIWIEEMKKVLPK
YPSVNLVTVAYGDDLSDKSYREAVGLLKSYPDLKVIVSPSSVGIVAAAQAVKDQGKIGKV
YVTGLGLPSEMAGAVKSGATKSFAIWNPIDLGYAATYLADDLVKGTATKTEANMGKLGKV
KLDADGSGAMSEPFVYDASNIDKFSKIF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaagacaagcttgatcctcaccgttgccgctctggcgttgtccggttccgca
ctagcagaagtcaaaattgccctggtcgcaaaatccctcggcaatggattttttgaggca
gcgaacgtcggtgcccaggaggcggctaaagagttaggggatgtaaaagtcatctatacc
ggcccgaccaccaccacggcggaggcgcagatcgaagtgctgaacggtttgatcgcccag
ggcgtagatgcgatcgccatttcggcaaacgatccggatgcggtcgtgccggtgttgaaa
aaagcgatgcagcgcggcatcaaagtggtgtcatgggactccggcgtggcgaaagcgggt
cgccagatccatctcaacccatcaaacaacgccctgattggtgaaaccaacgttaagctc
gccgccgaggcgctgaaggcgctgaacgtggaaaaaggcgacgtagcgatccttagcgcg
acgccaacctcgaccaaccagaacatctggattgaagagatgaaaaaggtgctgccgaag
tacccctccgttaacctggtgacggtggcctacggcgatgacctctccgataagagctac
cgcgaagcggtcggcctgctaaagagctacccggacctgaaagtgatcgtctctccctcc
tcggtgggcatcgtggccgccgcccaggcggtgaaggatcaaggcaagattggcaaggtg
tatgtcaccgggctgggcctgccgtcagagatggcgggcgcggtaaagtctggcgcaacc
aaaagctttgctatctggaacccgatcgatctgggctacgccgcgacctatctggctgac
gatctggtcaaaggcacggccaccaaaacagaagccaatatgggcaagcttggcaaggtg
aagctggatgctgacggcagcggcgcgatgtccgagccattcgtctacgatgccagcaat
attgataagttttccaagattttctga
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integrated database retrieval system
