Pseudescherichia vulneris: LMA04_13010
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Entry
LMA04_13010 CDS
T08658
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvj03016
]
LMA04_13010 (trmA)
Enzymes [BR:
pvj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
LMA04_13010 (trmA)
Transfer RNA biogenesis [BR:
pvj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LMA04_13010 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_15
Methyltransf_11
Methyltransf_31
Methyltransf_12
PrmA
TRM5-TYW2_MTfase
DREV
Motif
Other DBs
NCBI-ProteinID:
WAH51060
LinkDB
All DBs
Position
complement(2702527..2703627)
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AA seq
366 aa
AA seq
DB search
MTPEHLPIEQYDAQLDEKVVRLQKMMTPFSAPAPEVFRSPVSHYRMRAEFRIWHDGDDLY
HIIFDQQTKSRIRVDSFPAASALINQLMAAIMDSVRGNNVLRFKLFQIDYLSTLSGQAIV
TLLYHKKLDEAWQAEAQALRDALREQGLNVHIIGRATKTKIMLDQDYVDERLPVAGREMI
YRQVENSFTQPNAAMNIQMLEWALDVTTDSTGDLLELYCGNGNFSLALARNFDRVLATEI
AKPSVAAAQYNIAANEIDNVQIIRMAAEEFTQAMNGVREFNRLQGVDLKGYRCETIFVDP
PRSGLDSETEKMVQAYPRILYISCNPETLCQNLETFSQTHRVERLALFDQFPYTHHMECG
VLLVRK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgaacaccttccgatagaacagtacgacgctcagctggacgaaaaagtggtc
cgtctgcaaaagatgatgacgccattttccgcgcctgcgccggaggtgtttcgttctcct
gtcagtcattaccggatgcgggccgagtttcgtatctggcacgacggagatgatctgtac
cacatcatcttcgatcaacagaccaaaagccggatccgcgtggatagtttcccagccgcc
agcgcgctgatcaaccagttaatggctgcaataatggacagcgtacggggtaataatgtc
ctgcgtttcaagctgtttcagatcgattacttaagcacccttagcggtcaggccatcgtg
accttgctgtaccataaaaagctggacgaggcgtggcaggccgaggcgcaggctctgcgt
gatgcactgcgggagcagggtttgaacgtgcatatcattggccgggcaaccaaaaccaag
atcatgctggatcaggactacgttgatgagcgcctgccggtggcgggtcgggagatgatc
taccgtcaggtagagaacagttttacccagcctaacgcggcgatgaacattcagatgctg
gagtgggcgcttgacgtgaccaccgattcaaccggtgacctgctggagctgtactgcggt
aacggcaacttctccctggcgctggcgcgcaacttcgaccgtgtgctggcgaccgaaatc
gccaagccgtcggtggcggcggcgcagtacaacattgccgccaacgagatcgataacgtg
caaattatccgtatggcggcagaggagtttacccaggcaatgaacggggtacgtgagttt
aatcgtctgcagggtgtcgacctgaagggctatcgctgcgagacgatttttgtcgatccg
ccgcgcagcggtctggatagcgaaacagagaagatggtgcaggcctatccgcgtattctg
tacatctcctgcaacccggagacgctgtgccagaacctggagaccttcagccagacgcat
cgggttgaacgcctggcgcttttcgatcagttcccctacacgcaccatatggagtgcgga
gtgctgctggtaaggaagtag
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