Pseudescherichia vulneris: LMA04_13280
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Entry
LMA04_13280 CDS
T08658
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj03420
Nucleotide excision repair
pvj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMA04_13280 (uvrD)
03430 Mismatch repair
LMA04_13280 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_13280 (uvrD)
Enzymes [BR:
pvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMA04_13280 (uvrD)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMA04_13280 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LMA04_13280 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
DMP19
Motif
Other DBs
NCBI-ProteinID:
WAH51103
LinkDB
All DBs
Position
2760082..2762244
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAASRSNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLRRLIKAMNLDEKQWPPRQAMWYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTEGLDGELISLYCAFNELDEARFVVNRIKTWQESGGALEQCAILYRSNAQS
RVLEEALLQVGMPYRIYGGMRFFERQEIKDSLSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQASRDRQLTLWQASRELLQERALAGRAANALQRFLELIDALAQETADMPLHVQ
TDRVIKDSGLWMMYEQEKGEKGQARIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPENCVEEVRLRASISRPVNHQRMG
TPVAQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLEEV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgacgccgtggccgca
tcgcgcagcaatatgctggtgctggcgggcgcaggcagcggtaagacgcgtgtgctggtt
caccgtatcgcctggctgctgagcgtagagaactgctcgccctactcgattatggcggta
acctttaccaacaaagcggcggcagagatgcgccaccgtatcggccagctgatgggcact
actcagggcggcatgtgggtcggcaccttccacgggctggcgcaccgcttgctgcgcgct
catcatctggacgccaacctgccgcaggattttcagatcctcgacagcgaggatcagctg
cgcctgctgcgtcggctgatcaaggccatgaaccttgacgagaagcagtggccgccgcgc
caggcgatgtggtacatcaacggccagaaagacgaaggcatccgcccgcaccatattcag
agctttggtaacccggttgagcagacctggcagaaggtctatcaggcctaccaggaggcg
tgcgaccgcgccgggctggtagacttcgccgagctgctgctgcgcgcccatgagctgtgg
ctcaacaagccgcatattctcaaccactaccgcgagcgctttactaacatcctggtggat
gagttccaggataccaacaacattcagtacgcctggatccgcctgctggcaggcgatacc
ggcaaggtgatgatcgtaggcgacgacgaccagtccatctacggctggcgcggcgcgcag
gtagagaacatccagcgcttcctcaacgacttccctggcgcagagaccatccgcctggag
cagaactaccgctcgaccagcaacattctcagcgcggctaacgccctgattgagaacaac
aacggccgcctcgggaaaaagctctggaccgagggcctcgacggcgagctgatttcgctc
tactgcgcgttcaacgaactcgacgaagcgcgcttcgtggtgaaccgcatcaagacctgg
caggagagcggcggcgcgctggagcagtgcgcgattctctaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgcttcaggtggggatgccgtaccgtatctatggcggcatg
cgcttcttcgaacgccaggagatcaaagactccctctcctatctgcgcctgattgccaat
cgcaacgacgacgccgcctttgagcgcgtggtgaatacgccgacgcgcggcattggcgat
cgcaccctggacgtggtgcgccaggcatcgcgcgatcgtcagctgacactgtggcaggcc
agccgggagctgttgcaggagcgggccctggccggacgcgccgccaatgcgcttcagcgt
ttccttgagcttatcgacgccctggcccaggagaccgccgatatgccgctgcacgtgcag
accgaccgggtgatcaaagactccggcctgtggatgatgtacgagcaggagaagggcgaa
aagggtcaggcacgtatcgaaaacttagaggagctggtgacggcaacgcgccagtttagc
tataacgacgaagacgaagatctgatgccgctgcaggcgtttctctcccacgcggcgctg
gaagcgggcgaggggcaggccgatacctggcaggatgcggtgcagctgatgaccctccac
tcggcgaaggggctggagttcccgcaggtatttatcgtcggcatggaggaggggatgttc
cccagccagatgtcgctggacgagggcggcaggctggaggaggagcgccggctggcctac
gtcggcgtgacccgcgccatgcagaagctgacgctgacttatgcggagacccgccgtctg
tacggtaaagaggtctaccatcgaccgtcgcgctttatcggcgagctgccggaaaactgt
gtggaagaggtgcgcctgcgtgccagcattagccgcccggtgaaccatcagcgcatgggc
accccggtggcgcagaacgactccggctataagctcggccagcgcgtgcgccatccgaaa
tttggcgaaggcactatcgttaacctcgagggcagcggcgagcacagtcgtctgcaggtg
gccttccagggccaggggatcaaatggctggtagccgcttacgcccgccttgaagaagtg
taa
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