Pseudescherichia vulneris: LMA04_13460
Help
Entry
LMA04_13460 CDS
T08658
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00071
Fatty acid degradation
pvj00280
Valine, leucine and isoleucine degradation
pvj00310
Lysine degradation
pvj00362
Benzoate degradation
pvj00380
Tryptophan metabolism
pvj00410
beta-Alanine metabolism
pvj00640
Propanoate metabolism
pvj00650
Butanoate metabolism
pvj00907
Pinene, camphor and geraniol degradation
pvj00930
Caprolactam degradation
pvj01100
Metabolic pathways
pvj01110
Biosynthesis of secondary metabolites
pvj01120
Microbial metabolism in diverse environments
pvj01200
Carbon metabolism
pvj01212
Fatty acid metabolism
Module
pvj_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LMA04_13460 (fadB)
00650 Butanoate metabolism
LMA04_13460 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LMA04_13460 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LMA04_13460 (fadB)
00310 Lysine degradation
LMA04_13460 (fadB)
00380 Tryptophan metabolism
LMA04_13460 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LMA04_13460 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LMA04_13460 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LMA04_13460 (fadB)
00930 Caprolactam degradation
LMA04_13460 (fadB)
Enzymes [BR:
pvj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LMA04_13460 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LMA04_13460 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LMA04_13460 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LMA04_13460 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
WAH51134
LinkDB
All DBs
Position
complement(2795258..2797447)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGDTLYLDWLENGIAELVFAAPGSVNKLDTATVASLGQALDVLEKSPDLTGLLLRSD
KAAFIVGADITEFLSLFQVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVGAEQALK
IGLVDGIVTAEKLRDGALAVLRQAIDGDLDWRAKRQPKLEPLKLSKIEAAMSFTIAKGMV
MQTAGKHYPAPLTAVKTIEAAARFGRDEALALENQSFVPLTHTNEARALVGIFLNDQYVK
GQAKKLTQNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVLMKDINDKSLTLGISEASKLL
NKQLERGKIDGLKLAGVIATIHPTLDYTGFDRVDVVVEAVVENPKVKKAVLAETEQKVRP
DTVLASNTSTIPISELASVLQRPENFCGMHFFNPVHRMPLVEVIRGEKTSEETLAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFGQLLRDGADFRRVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMQKDYRDAIDVLFDAGRFGQKNGQGFWRYKEDSKGKP
KKEEDAAVDGLLAEVSQPRRDFSDEEIIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTQGSASYLDRAQQFAALGPLYAVPDGLREKARHNESYYPPVAPA
RPAGVLKSA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcgataccctgtacctcgactggctggaaaatggcattgcagaactg
gtgttcgcggcccccggctcggttaacaagctcgatacggcgacggtggcgagtctcggc
caggcgctggacgtgctggaaaaaagccccgacctcaccgggctgctgctgcgctccgac
aaagccgcctttattgtcggcgcggacatcaccgaattcctctctctgttccaggttccc
gaggagcagcttagccagtggctgcacttcgcgaatagcgtgtttaaccgcctggaagat
ctgcctgttccgacgatctctgccgttaacggctatgcgttgggcggcggctgcgagtgt
gtgctcgccaccgactatcgtctggcgacgccggacctgcgcattggcctgccggaaacc
aagctggggattatgccaggctttggtggttcggtacgcatgccgcgcctgctgggggct
gatagcgcgctagagatcatcgctgctggcaaagacgtgggcgctgaacaggcgctaaaa
attggcctggtcgatggcatcgtgacggcagagaaactgcgcgacggcgcgctggcggtt
ctgcgccaggcgatcgatggcgatctggactggcgcgccaaacgccaaccgaagctggag
ccgctgaagctgagcaagattgaagccgccatgagctttaccatcgccaaaggcatggtg
atgcagacggcaggcaagcactaccccgccccgctgacggcggtgaaaaccattgaggcg
gcggccaggtttggccgtgatgaggccctggcgcttgagaaccagagctttgtgccgctc
acccacaccaatgaagcccgcgcgctggtaggcatcttcctgaacgatcagtatgtcaaa
ggccaggcgaaaaagctgacccagaacgtcgagaccccgaagcaggccgccgtgctgggc
gcaggcattatgggtggcggtatcgcttaccagtccgcatggaaaggcgtgccggtgctg
atgaaagatatcaacgacaaatccctgacgctgggcatcagcgaggccagcaagctgctc
aataagcagcttgagcgcggcaagattgacggtttgaagctggcgggggtgattgctacc
atccatcccaccctcgactacacgggttttgatcgcgtcgacgtggtggtggaagcggtc
gtcgagaatccaaaggtgaaaaaagcggtgctggcagagaccgaacagaaggtacgcccg
gatacggtgctggcctccaacacctcgactattcctatcagcgaactagccagcgtgctg
caacgcccggagaacttctgcggcatgcacttctttaacccggtacaccgcatgccgctg
gtagaggtgatccgtggcgaaaaaacctcggaagagaccctcgccaaagtggtcgcctgg
gcgagcaaaatgggcaaaacgcctatcgtcgttaacgactgccccggcttcttcgtcaac
cgcgtcctgttcccctactttgccgccttcggccagctcctgcgcgatggtgcggacttc
cgccgcgtagataaggtgatggagaagcagtttggctggccaatgggcccggcctatctg
ctggacgtggtgggcatcgatacggcacatcacgctcaggcggtcatggccgctggcttc
ccggagcgcatgcagaaagattaccgcgacgctattgacgtgctgtttgatgcaggccgc
ttcgggcagaaaaacggtcagggcttctggcgttataaagaggacagcaaaggcaagccg
aagaaagaggaggatgctgccgttgacggcctgctggcagaggttagccagccgagacgt
gacttctctgacgaggagattattgcccggatgatgatcccgatggtcaacgaagtggtg
cgctgtctggaggagggcattatcgccagcccggcggaagcggatatggcgctggtgtac
ggccttggcttcccgccgttccacggcggcgcgttccgctggctcgacacacagggcagc
gccagctatctcgatcgggcgcagcagtttgccgctctcggcccgctctacgctgtgccg
gacggcctgcgtgagaaagcgcgccataacgaatcctattatcctcccgttgcgccagcc
cgcccggcaggcgttctgaaatcggcttaa
DBGET
integrated database retrieval system
