Pseudescherichia vulneris: LMA04_13925
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Entry
LMA04_13925 CDS
T08658
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_13925 (radA)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMA04_13925 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
RecA_N
GvpD_P-loop
Rad51
AAA_22
SLFN-g3_helicase
ABC_tran
AAA_14
nSTAND_NTPase5
AAA_16
NTPase_1
nSTAND3
AAA
cobW
Herpes_Helicase
AAA_24
Zeta_toxin
DZR
AAA_29
Viral_helicase1
AAA_5
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
WAH51211
LinkDB
All DBs
Position
complement(2898279..2899661)
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRVAASPTVARNERLSGYAGNAGV
SKVQKLSEISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS
ENMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICMIADEELPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDQSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPDDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKPPAGMQVFGVKKLADALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagctccaaaacgcgcatttgtctgtaatgaatgcggtgcggattatccgcgc
tggcaggggcagtgcagcgcctgtcatgcctggaacaccatcaccgaggtgcgcgttgcg
gcatccccaacggttgcgcgcaacgagcgcctgagcggctatgcaggtaacgcaggcgtg
tcgaaggtgcaaaagctgtcggagatcagtctggaagagctgccgcgcttctccactggc
tttaaagagtttgaccgcgtgctgggtggcggcgtcgtgccgggcagcgcgatcctgatc
ggcggtaacccaggggcaggcaagtcgacgctgctgctgcaaaccctgtgcaagctctcc
gagaacatgaagacgctgtacgttaccggggaggagtcacttcagcaggtagccatgcgc
gcccatcgcctggggttgccgaccgctaacctgaatatgctctccgagaccagcatcgag
cagatctgcatgattgctgacgaagagctgccgaagctgatggtcattgactcaatccag
gtgatgcacatggcggatatccagtcgtcaccgggcagcgtggcccaggtgcgtgagacg
gcggcctacctgacacgcttcgccaagacgcgcggcgtcgccatcgtgatggtgggtcac
gtcaccaaagatggctcgctggccgggccgaaggtgctggagcactgcatcgactgttcg
gtgctgctggacggtgacgccgactcgcgcttccgcaccctgcgcagccataaaaaccgc
ttcggcgcggtgaacgagctgggcgtctttgccatgaccgagcagggcctgcgcgaggtc
agcaacccgtcggctatcttccttagccggggcgacgaagtgacctctggcagctcggtg
atggtggtctgggagggcacgcgtccgctgctggtagagatccaagccctggtagatcag
tcgatgatggccaacccgcgccgcgtggcggtggggctggagcagaatcggctggcgatc
ctgctggcggtgctgcatcgccacggcggattgcagatggcggatcaggatgtctttgtg
aacgttgtcggcggggtaaaagtcaccgagaccagcgccgacctggcgctgctgctggcg
atggtctccagcctgcgcgaccgcccgctgccggacgatctggtggtgtttggcgaggtc
gggctggccggcgagatccgcccagtgccgagcggccaggagcgtatctccgaggcggcg
aagcacggttttcgccgggcgatcgtccctgccgccaacgtaccgaaaaaaccaccggcc
gggatgcaggtgtttggcgtgaaaaaacttgccgatgcgctaagcgtctttgacgactta
taa
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