KEGG   Pseudescherichia vulneris: LMA04_14260
Entry
LMA04_14260       CDS       T08658                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pvj  Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:pvj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pvj02048]
    LMA04_14260
Enzymes [BR:pvj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LMA04_14260
Prokaryotic defense system [BR:pvj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LMA04_14260
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 SNF2-rel_dom
Other DBs
NCBI-ProteinID: WAH51275
LinkDB
Position
complement(2971260..2974376)
AA seq 1038 aa
MTQQTHTIAESNNFIVLDKYTKVLDTGDSYQSESDLERELIQDLLNQGYEFISVKSPTAM
LANVRDQLQRLNGVVFNESEWRRFAEQYLDSPSDSSLDKTRKIHIDYICDFTFDDGRLEN
IYLIDKKNLLRNKVQVIQQFEQTGSHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQI
HRYSKESFNSDNSLFKYLQLFVISNGTDTRYFASTTKRDKNSFDFTMNWAKSDNTLIKDL
KDFTATFFQKHTLLNVLFNYSVFDSSQTLLVMRPYQIAATERILWKINSSFKAKNWSKPE
SGGFIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVNG
SDNTAGLRRNLDKDDNKIIVTTIQKLNNLMKAEADLPVYQQQVVFIFDECHRSQFGEAQK
NLKKKFRRFYQFGFTGTPIFPENALGAETTTSVFGRELHSYVITDAIRDEKVLKFKVDYN
DVRPQFKSLETETDEKKLSAAENQQAFLHPLRIQEITQYILNNFRQKTHRTFPGAKGFNA
MLAVSSVDAAKAYYTTFKMLQEEAEKKSGSYKCLRVATIFSFAANEEQSAIGDITDESFD
TSAMNSSAKEFLDSAIDDYNNHFKTNFSTDSNGFQNYYRNLAQRVKNQDIDLLIVVGMFL
TGFDAPTLNTLFVDKNLRYHGLMQAFSRTNRIYDATKTFGNIVTFRDLERPTIDAITLFG
DKNTKNVVLEKSYEEYMQGFTDAATGEAKRGFMAVVSELEQRFPDPASIDSEKEKKAFVK
LFGEYLRAENILQNYDEFATLKALQKVDISDPEAVETFKAEHYVDDEKFAELQTIRLPAE
RKVQDYRSAYNDIRDWQRREKAANDRDKSTTDWDDVVFEIDLLKSQEINLDYILGLIFDH
NRQKKGKEALTEEVRRLIRSSLGNRAKEGLIVDFIQQTNLDDMPDKASIIDAFFTYAQRE
QQREAEALIKEENLNEEAARRYIRTSLKREYATENGTELNETLPKLSPLNPQYKTKKQTV
FQKIGAFIEKFKGVGGHL
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgacacaacagacacacaccattgctgaatccaataactttatcgtccttgataaatac
accaaagttctggataccggtgacagctaccagagcgaatcggaccttgagcgggagctg
attcaggaccttcttaatcaggggtatgagtttatctccgttaagtcaccgactgcgatg
ctggcgaatgtgcgggaccagcttcagcgtcttaatggtgtggtgtttaacgaaagtgaa
tggcggcgtttcgcagagcagtatctcgacagccccagtgacagcagcctggacaaaacc
cgtaaaatccatatcgactatatctgtgatttcacgtttgatgacggtcgtctggaaaac
atctatctgatagataaaaagaacctgctgcgcaataaggtgcaggtcattcagcaattt
gagcagactggctcacacgctaaccgttatgacgtcaccattctggtcaacggccttcca
ctggtgcaaatcgaactcaaaaaacgcggtgtggcgattcgtgaagcctttaaccagata
caccgttacagcaaggaaagctttaacagcgataactccctgtttaaatacctgcaactc
ttcgtgatttccaacgggactgatacccggtactttgccagtaccactaagcgggataaa
aacagctttgatttcaccatgaactgggcaaagtcggataacactctgattaaggacctg
aaggactttaccgccactttcttccagaagcatactctgctgaatgttctgtttaattac
agcgtgtttgacagcagccagacgctgctggtcatgcgtccctatcagattgccgccacc
gagcgcattctctggaaaattaacagctcatttaaagcgaagaactggtcaaaacccgaa
agcggcgggtttatctggcataccacagggtcaggaaaaaccctgaccagctttaaggcc
gcacgtctggctacggaactggactttattgataaagtcttcttcgtggtcgacaggaaa
gacctcgattaccagaccatgaaggagtatcagcgcttctctccggacagtgtcaatggt
tccgataatacagcaggcctcagaagaaacctggataaggacgataacaaaatcatcgtc
acaaccattcagaaactcaataacctgatgaaagccgaagctgacctgcccgtctaccaa
cagcaggtggtgtttatctttgatgagtgtcaccgcagccagtttggtgaggcccagaaa
aacctcaaaaagaaattcagacgcttttatcagtttggttttaccggtacgcctattttc
cccgaaaacgcactgggagcagaaaccacaaccagcgtgttcgggcgtgagttacattct
tacgtcattactgatgcgattcgtgatgaaaaagtactgaagtttaaggtggactataac
gatgtccgcccacagtttaagtctcttgaaacggaaacagacgagaaaaaactcagcgcg
gctgaaaaccaacaggcatttttgcaccccctgcgtatccaggaaataacgcaatacatt
ctcaataacttccgtcagaaaacgcaccgaaccttcccgggagccaagggctttaacgcc
atgttagcagttagcagcgtggacgcggcgaaagcttattacacgacgtttaaaatgcta
caggaagaagcagagaagaaatctggcagctataaatgccttcgggtggcaaccatcttc
tcctttgctgcaaatgaagagcaaagcgccattggtgatattactgacgaaagctttgat
accagtgcaatgaacagcagcgcgaaggaattcctggattcagccattgatgactataac
aatcactttaaaaccaatttcagcaccgacagtaacggtttccagaactactaccgcaat
ttagctcaacgagtgaaaaatcaggatattgaccttctcatcgtggtgggaatgttcttg
actggctttgatgctccgacgctcaatactctgttcgttgacaaaaacctgcgttatcac
ggtctgatgcaggcattctcacgcaccaaccgtatctatgatgcaaccaaaaccttcggc
aatatcgtgactttcagggacctggagcgtccgaccattgatgccatcacactttttggc
gacaaaaacaccaagaatgtggtgctggaaaaaagctacgaagagtacatgcagggcttt
accgatgcggcaaccggtgaggctaaacgaggttttatggctgttgtttcggagctggag
cagcgcttccctgaccctgccagtatcgacagtgaaaaagagaaaaaagccttcgtcaaa
ctgtttggtgaatatctgcgggcagaaaacatcctgcaaaactatgatgaatttgccacg
ctgaaagccctgcagaaggttgatattagtgacccggaagcggtagaaacctttaaagca
gagcactatgtggatgatgaaaaatttgctgaattacaaaccattcgtctcccggcagaa
cgtaaagttcaggactatcgctcagcatacaatgatatccgggactggcagcgacgcgaa
aaagcagcaaacgacagggataaatcaaccacagactgggatgatgtggtgtttgaaatt
gacctgctgaagtcgcaggagattaacctggactacatccttggtctgattttcgaccac
aatcgtcagaaaaaaggtaaagaagccctgactgaagaggtcagacgcttaatccgctca
agtctgggcaaccgtgccaaagaaggtctgattgttgactttattcagcaaactaacctt
gatgacatgcccgacaaagccagtatcattgatgcattctttacttatgctcagcgtgaa
cagcagcgggaagcggaagcgttgattaaggaagaaaacctcaatgaagaggctgcaagg
cgttacatccgcacatcactcaaacgggagtatgctaccgaaaatggcactgagctaaat
gagacgctaccaaagctcagtccgctgaatcctcagtacaaaacgaaaaagcagaccgta
ttccagaaaattggggcgtttatcgaaaaatttaaaggggttggaggacacctctag

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