Pseudescherichia vulneris: LMA04_14480
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Entry
LMA04_14480 CDS
T08658
Symbol
mscM
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvj02000
]
LMA04_14480 (mscM)
Transporters [BR:
pvj02000
]
Other transporters
Pores ion channels [TC:
1
]
LMA04_14480 (mscM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
WAH51316
LinkDB
All DBs
Position
complement(3016943..3020275)
Genome browser
AA seq
1110 aa
AA seq
DB search
MRLIIAFLMAWCLSAGAYAATIPDAKQIAQELEQAKAAAASPEQAETVEALQSALNALEE
RNGSLERAKQYQQVIDDFPKLSQTLRAQLNGLRDEPKAVPAGITTDALNQEILQVSSQLL
EKTRQAQQEQERAREINDSLSQLPQQQTDARRQLSEVERRIGTQSGTTSLAQAQTLSAQA
NSAKLKAQVDELELAQLSANNRQELARMRSELAQKQAQQLDTYLQALRNHLNSQRQREAE
QALESTELLAENSANLPAGIVDQFKINRELSQALNQQAQRMDLVASQQRQATGQTLQVRQ
ALNTLREQSQWLGVSNMLGDALRAQVARLPEMPKPQQLDTEMAQLRVHRMHYEDLLNKQP
QLRQIRQADGQPLTAEQSRILEAQLRTQRELLTSLLQGGDTLILELTKLKVSNSQLEDAL
KEVNEATHRYLFWTADVSPMTLSWPIEIVQDLRRLISLDTVNQLGKATMMMLTSKETLLP
LFAALVLVGFSVYSRKHFTRFLERSSAKVGKVTQDHFWLTLRTVFWSILVASPLPVLWAT
LGYGLRSAWPYPLAVAIGDGVTATVPLLWVVMICATFARPTGLFVAHFGWPRSRVARGLR
SYLMSIGLIVPLIMALIMFDNLNDREFSGSLGRLCFMLICGALAVVTLSLKRAGIPLYVD
KTGSGDNMVNRMLWNLLLSAPLAAMLAAAVGYLATAQALLARLETSVAIWFLLLVVYHVI
RRWMLIQRRRLAFDRARHRRAEILAQRARGEEEQAHSTSTEGAVEVDESELDLDAISAQS
LRLVRSILMLIALLSVIVLWSEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAI
LVFIITTQLVRHLPALLELALLQHLDLTPGTGYAITTITKYLLMLFGGLVGFSMIGIEWS
KLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATT
ISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPSDANSEEVTQLLYTAAERCS
LVIDNPPPEVFLVDLQQGIQLFELRIYAAEMGHRMPLRHEIHQLILQGFREHGIDLPFPP
FQMRLESLDGKRTARTLSSAGRSQRPSGSL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgattatcgcatttctgatggcctggtgcctcagcgcgggggcgtacgctgcg
acgatccccgacgccaaacagatcgcccaggagctggagcaggctaaagcggccgccgcc
tcacccgagcaggcagaaaccgtggaggcgctccagtccgcgctgaacgcccttgaggag
cgcaacggctcccttgagcgcgctaaacagtatcagcaggtcatcgacgacttccccaaa
ctctcccagacgctgcgcgcccagctcaacggcctgcgcgacgaaccgaaagccgttccg
gcaggtattaccaccgatgcgctgaaccaggagatcctccaggtcagcagccagctgtta
gaaaagacgcgtcaggcccagcaggagcaggaacgcgcccgggagatcaacgactcctta
agccagcttccccagcagcagaccgacgcccgccgtcagctaagcgaggtcgagcgccgt
atcggtacccagagcggcacaacctcgctggcccaggcgcagaccctgagcgcgcaggcc
aactctgccaagctcaaggctcaggttgacgaactggagctggcccagctgtcggcgaac
aaccgccaggagctggcgcggatgcgatccgagctggcccagaagcaggctcagcagctg
gatacctatctgcaggccctgcgtaaccatctcaacagccagcgccagcgcgaggccgag
caggcgctggagagcaccgagctgctggcggagaacagcgccaacctgcccgcaggcatc
gttgaccagttcaaaatcaaccgcgagctgtcgcaggcgcttaaccagcaggcccagcgg
atggatctggttgcctcccagcagcggcaggcaaccggccagacgttgcaggtccgccag
gccctgaatacgctgcgcgagcagtcccagtggctgggggtctccaacatgctcggcgat
gcgctgcgcgcccaggtggcccgactgccggagatgccgaagccgcagcagctggatacc
gagatggcccagctgcgggtgcaccgcatgcactacgaagatctgctcaacaagcagccc
cagctgcgccagatccgccaggcggatggccagccgctgaccgccgagcagagccgtatc
ctggaggcgcagctgcgcacccagcgcgagctgctcacctctctgctgcaggggggcgat
acgctgatccttgagctgaccaagctgaaggtctccaacagccagcttgaggatgcgcta
aaagaggtcaacgaagccacccaccgctatctcttctggaccgccgacgtcagcccgatg
acgctcagttggccgattgagattgtgcaggatctgcgtcgcctcatctcgctggatacc
gttaaccagctcggcaaggcaaccatgatgatgctgaccagcaaggagacgctgctgccg
ctgtttgccgcgctggtcctggtaggcttcagcgtctactcccgcaagcacttcacccgc
ttcctggagcgctccagcgcgaaggtaggcaaggtgactcaggatcacttctggctcacg
ctgcgcacggtgttctggtcgatccttgtggcctccccgctgccggtgctgtgggcaacg
ctcggctacggcctgcgatccgcctggccctacccgctggcggtggcaattggcgatggt
gtgaccgccaccgtgccgctgctgtgggtagtgatgatctgcgccaccttcgcccgcccg
accgggctgtttgtcgcgcattttggctggccacgcagccgggtcgcacgcggcttgcgc
tcctacctgatgagcatcggcctgatcgtgccgctgattatggcgctgatcatgtttgat
aacctcaacgaccgcgaattctccggctcccttggccgtctctgctttatgctcatctgc
ggcgcgctggctgtagtaacgctgagcctgaaacgcgccgggatcccgctctacgtcgat
aaaaccggcagcggcgacaacatggttaaccgtatgctgtggaacctgctgctgagcgcc
ccgctggcggcgatgctggcggcggccgtgggctatctggcgactgcccaggcgctgctg
gcccggctggagacctcggtggcgatctggttcctgctgctggtggtgtatcacgtcatc
cgccgctggatgctgatccagcgccgccgtctggcctttgaccgcgcaagacatcgccgg
gcagaaattttggcccagcgcgcccgtggcgaagaggagcaggctcactccaccagcacc
gagggcgcggtagaggtagatgaaagcgagctggatctcgacgccatcagcgcccagtcg
ctgcggctggtgcgctcgattttgatgctcatcgccctgctctcggtgattgtgctgtgg
tccgagatccactcggcgtttggcttcctggagaatatctccctgtgggacgtcacctcg
acggtacagggggttgagagcctggagccgattactctcggcgcggtactgatcgccatt
ctggtgtttatcatcacgacccagctggtgcgtcatctgcctgccctgctggaactggcg
ctgctccagcacctcgacctgacgccaggaacgggctatgccatcaccaccattaccaaa
tatctgctgatgctgttcggtggcctggtgggcttctctatgatcggtatcgagtggtca
aaactgcagtggctggtagcagctctcggtgtgggattaggctttggtttacaggagatc
ttcgccaactttatctctggcctgatcatcctgttcgaaaagccgatccgcattggcgat
accgtgaccattcgcgatctcaccggtagcgtaacgaagatcaacacccgtgccaccacc
attagcgactgggaccgtaaagagatcatcgtgccgaataaggcgtttatcaccgagcag
tttatcaactggtcgctgtcggattcggtgacgcgtgtggtgcttaccgttcccgcgccc
tccgatgccaatagcgaagaggttacccagctgctctacaccgccgctgagcgctgctcg
ctggtgatcgataacccgccgccggaggtctttttggtggatctgcagcagggtatccag
ctctttgagctgcgtatctacgctgccgagatgggacaccgaatgccgctgcgccacgag
atccatcagctgatcctgcagggcttccgcgagcacggcatcgacctgccgttcccaccg
ttccagatgcgtctggagtcgctcgacggcaaacgcaccgccagaacgctaagctctgcc
ggacgcagccagcgtccatcgggcagtctgtaa
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