Pseudescherichia vulneris: LMA04_15890
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Entry
LMA04_15890 CDS
T08658
Symbol
ygfZ
Name
(GenBank) tRNA-modifying protein YgfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvj03016
]
LMA04_15890 (ygfZ)
Transfer RNA biogenesis [BR:
pvj03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
LMA04_15890 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
DUF6237
Motif
Other DBs
NCBI-ProteinID:
WAH51581
LinkDB
All DBs
Position
complement(3320298..3321281)
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AA seq
327 aa
AA seq
DB search
MAFTPFPPRQPSASARLPLTLMTLDDWALATLTGADSEKYLQGQVTADVAALTEHQHLLA
AHCDAKGKMWSNLRLFRRDGGFAFIERRSIRDAQLTELKKYAVFSKVTIAPDDEHVLLGV
AGFQARAALANVFTTLPDADKQVVQEGATSLLWFAHPAERFLLVTDVATAELISEKLRGE
AQLNNSQQWLALNIEAGLPVIDAANSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKF
RGANKRALWYLAGKASRLPEPGEDLELKMGENWRRTGTILAAVQLEDGRLLVQAVMNNDM
EPDSVFRVRDDANTLSIEPLPYSLEEA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactccttttcctccgcgccagccttccgcctctgcgcgtctgccgctgacg
ctaatgacacttgacgattgggcgctggcaactctgaccggtgccgatagcgaaaagtat
ctgcagggccaggtcaccgctgacgttgccgccctgaccgagcatcagcatctgctggca
gcgcactgcgatgccaaaggcaaaatgtggagcaacctgcgcctgtttcgccgcgacggc
ggctttgctttcattgagcgccgcagcattcgagatgctcagctgaccgagttaaaaaaa
tatgcggtcttctctaaggtcaccatcgcgccggatgatgagcacgtgctgctgggcgtg
gcgggttttcaggcccgtgccgcgctggcgaacgtgtttaccacgctgcctgacgctgac
aagcaggtcgtacaggagggggcaacctctcttctctggttcgcgcacccggcagagcgt
ttcctgctggtcaccgacgtggctacggcggagctgattagcgagaagctacgcggcgaa
gcacagctgaacaacagccagcagtggctggcgctgaacattgaagctggcctgccggtg
atcgacgccgccaacagcgcccagttcattcctcaggcgaccaacctgcaggcgctcggt
ggcatcagctttaagaaagggtgctacaccggccaggagatggtcgcccgggcgaagttc
cgcggtgccaacaagcgcgccctgtggtatctggcaggtaaagcgagccgcctgccggag
ccgggggaagatcttgagctgaagatgggtgaaaactggcgccgcaccggcactattctc
gctgcggtccagcttgaagatggtcgcctgctggtacaggcagtgatgaacaacgatatg
gagccggacagcgtcttccgcgtgcgcgacgatgccaatacgctcagcatcgagccgctg
ccctactcgcttgaagaagcttaa
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