Pseudescherichia vulneris: LMA04_15920
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Entry
LMA04_15920 CDS
T08658
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj03410
Base excision repair
pvj03430
Mismatch repair
pvj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMA04_15920 (recJ)
03430 Mismatch repair
LMA04_15920 (recJ)
03440 Homologous recombination
LMA04_15920 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_15920 (recJ)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LMA04_15920 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMA04_15920 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMA04_15920 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
WAH51587
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All DBs
Position
3324471..3326204
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AA seq
577 aa
AA seq
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MKHQRQLRRRTVDEAADLPANLPPLLRRLYASRGVRSAGELERSVKGMLSWQQLSGIDNA
VALLYRALQEELRIVVVGDFDADGATSTALSVLALRALGCGNVTCLVPNRFDDGYGLSPE
VVDQAHARGAQMILTVDNGISSHAGVDRAHELGIPVLVTDHHLPGETLPAAEAIVNPNLR
DCTFPSKSLAGVGVAFYLMLALRAHLRDQGWFAARGLVEPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNVGEARVLASELDALNQTRKEIEQGMQSEALALCEKLERSSETLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGLLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEAARFEEFQQRFGDLVTEWLDPALLQGEVVSDGPLSPVEMTLE
VAEMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTT
IWPDNGVREVTLAYKLDVNEFRGNRSVQLIIDDIWPV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatcagagacaacttcgccgccgaacagtggatgaggcggcggatctgccagcg
aacctgcccccgctgctgcggcgcttatatgccagccgcggcgtgcgttcggccggggag
ctggagcgcagcgtaaaagggatgctctcatggcagcagctcagcggcattgataacgcc
gtagcgctgctctatcgcgccctgcaggaggagctgcgcattgtcgtggtcggcgatttt
gatgccgacggcgccaccagcaccgccctgagcgtgctggccctgcgtgcgctgggttgc
ggaaacgtcacctgtcttgtaccgaaccgttttgacgacggctacgggctaagcccggaa
gtggtcgatcaggcccatgcccgcggcgcgcagatgatcctgaccgtggataacggtatc
tcctcccatgctggcgtcgatcgtgcccatgagctggggatcccggtgctggtgaccgat
caccacctgccaggcgagacgctgccggccgccgaggcgatcgtgaacccgaacctgcgc
gactgcaccttcccgtcgaagtcgctggcgggggtaggggtcgctttctacctgatgctg
gctttgcgcgcccatctgcgcgaccaaggctggtttgcagcacgtgggctggtcgagcct
aacctggcggagctgctggatctcgttgcccttggcacggtagccgacgtggtgccgctg
gacgctaacaaccgtattttgacctggcaggggctgagccgcattcgggcaggcaagtgc
cgcccaggcattaaggcgctgctggagatcgccaaccgcgacgcacagaagctggcggcc
agcgatctcggttttgccctcggcccccggcttaacgccgctggacggcttgacgatatg
tcggtaggcgtggcgctgctgctgtgcgataacgtcggcgaagcccgggtgttagccagc
gagttggacgcccttaaccagacgcgtaaagagattgagcaggggatgcagtccgaagcg
ctggcgctctgcgagaagctggagcgcagcagcgagacgctgcccggcgggctggcgatg
tatcatcctgagtggcatcagggcgtagtgggtattctcgcctcgcgcattaaagagcgc
ttccaccgcccggtgatagcctttgcccccgcgggggatggcctgctgaaaggctccggc
cgctcgattcagggcctgcatatgcgcgatgcccttgagcgtctcgacacgctctatcca
ggcatgatgctgaagttcggtggccacgcgatggcggctggtctgtcgctggaggcagcg
cgctttgaggagttccagcagcgctttggcgacctggttaccgagtggctggatcccgct
ctgttacagggggaggtggtctccgacggtccgctttcgcccgtcgaaatgacgctggag
gtggccgagatgctgcgtgacgccgggccgtgggggcagatgttcccggagccgctgttt
gacgggcgttttcgcctgctgcagcagcgtattgtcggcgagcgtcatctaaaggtgatg
gttgagccagttggcggcggcccgctgctggacggcatcgcgtttaacgtcgataccact
atctggccggacaatggcgtgcgcgaagtcacccttgcctataaacttgatgttaacgag
ttccgaggtaaccgcagcgtgcagctgatcatcgacgatatctggccggtttag
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