Pseudescherichia vulneris: LMA04_16120
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Entry
LMA04_16120 CDS
T08658
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00260
Glycine, serine and threonine metabolism
pvj00270
Cysteine and methionine metabolism
pvj00450
Selenocompound metabolism
pvj00670
One carbon pool by folate
pvj01100
Metabolic pathways
pvj01110
Biosynthesis of secondary metabolites
pvj01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LMA04_16120
00270 Cysteine and methionine metabolism
LMA04_16120
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LMA04_16120
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LMA04_16120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvj04147
]
LMA04_16120
Enzymes [BR:
pvj01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
LMA04_16120
Exosome [BR:
pvj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LMA04_16120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WAH54517
LinkDB
All DBs
Position
complement(3372178..3373296)
Genome browser
AA seq
372 aa
AA seq
DB search
MHSGTFNDQHGAVMPPIYATSTFAQPAPGQHTGYEYSRSGNPTRHALESAIAELESGTRG
YAFASGLAAISTVLELLDKDSHIVAIDDVYGGTYRLIENVRRRSTGLQVSWVKPDDLAGL
EAAIRPDTRMIWVETPTNPLLKLADLAAIAGIARRHHVISVADNTFASPLIHRPLTLGFD
IVVHSATKYLNGHSDVVAGLAVVGDRPELAEKLGYLQNAVGGVLDPFSSFLTLRGIRTLA
LRIERHSSNALALARWLEQQQQVEKVWFPWLTSHPQYALARQQMAQPGGMISIVIKGDDQ
RAAEVISKLKLFTLAESLGGVESLVSQPFSMTHASIPLAQRLANGITPQLIRLSVGIEDE
QDLLADLQQALA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgcacagcggcacctttaacgaccagcacggggcggtgatgccgcctatctatgctacc
tccacctttgcccagcccgcgccgggccagcacaccggctacgagtactcccgcagcggc
aaccccacgcgccacgctctggagagcgccatcgccgagctggagagcggcacgcgcggc
tacgcctttgcctccggtctggcggcaatctctaccgtgctggagctgctggataaagat
agccatatcgtcgccatcgacgacgtctacggtggcacttaccggctgattgagaacgtg
cgccgccgcagcaccgggttacaggtaagctgggtgaagccggacgatctcgccgggctg
gaggccgccatccgcccggatacgcggatgatctgggtggagacgcccactaacccgctg
cttaagctggcggacctggcggctatcgccgggatcgcccgccgtcaccacgttattagc
gtggccgataacaccttcgcctcgccgctgatccaccgtccgctgacgctgggctttgat
atcgtggtgcactctgccaccaaatacctcaacggccactccgacgtggtggccgggctg
gcagtggtgggcgatcgccccgagctggcggagaagctgggctacctgcaaaacgcggta
ggcggcgtgctcgatccgttcagcagcttcctgacgctgcgcggcatccgcaccctcgcc
ctgcgcatcgagcgccacagcagcaacgccctggcgctggcccgctggcttgagcagcag
cagcaggtagagaaagtgtggttcccgtggctaacgtcccacccgcagtatgccctcgcg
cgtcagcagatggctcagccgggcggcatgatctccatcgtgattaaaggtgacgaccag
cgcgcagcagaggtgattagcaaactgaagctgttcaccctcgccgagagcctcggcggc
gttgagagcctggtgagccagccgttcagcatgacccacgcctcgatcccgctggcgcag
cgcctggcgaacggcattacgccgcagctgatccgcctgtcggtgggcattgaggatgag
caggatctgctggcggatctgcagcaggcgctggcctga
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