Pseudescherichia vulneris: LMA04_16150
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Entry
LMA04_16150 CDS
T08658
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00040
Pentose and glucuronate interconversions
pvj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LMA04_16150
Enzymes [BR:
pvj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
LMA04_16150
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
PolyG_pol
Motif
Other DBs
NCBI-ProteinID:
WAH51626
LinkDB
All DBs
Position
complement(3378448..3379623)
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AA seq
391 aa
AA seq
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MAKGMRVKLNYDVSRDPDTGAEVIRLTPPEVTCHRNYFYQKCFFNDGSHLIFAGEFDGHW
NYYLLNIEQAEAVQLTEGAGDNTFGGFLSPDDSALYYVKNDRTLREVNLKTLAEREVYRV
PDEWVGYGTWVANSDCTKLVGIEIAKSDWTPLNDWKIFHDFFLKGPRCRLLRVDLQTGES
ATIHEEKLWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNMRKVKTHAEGESC
THEFWVPDGSALVYVSYLKGEQGRTVYRFDPTTGVNEAIMAMPACSHLMSNFDGTLLVGD
GSGSPVDVNDADGYSIDNDPYIYVFDVAEKRYYRAARHDTSWATVANSRQVTHPHPSFTP
DDSAVLFSSDKDGKPALYIARLPEQREWLQA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggtatgcgagttaagctcaactatgatgttagccgcgatccggacacgggt
gcggaagtgatccgcttaacgcctcctgaagtcacctgtcatcgtaactacttctatcag
aaatgcttttttaacgatggcagccatctgatcttcgctggcgaatttgatggccactgg
aactactatctgctgaacattgagcaggccgaagcggtgcagctgaccgagggcgctggc
gataacacctttggcggcttcctgtcgccggacgatagcgcgctctactacgttaaaaac
gaccgcaccctgcgggaagtgaacctcaaaaccctggccgagcgtgaagtctatcgcgtg
ccggatgagtgggttggctacggcacctgggtagcgaacagcgactgcactaaactggtc
ggcatcgaaattgccaaaagcgactggacgccgctcaacgactggaaaattttccacgac
ttcttcctgaagggtccccgctgccgcctgctgcgcgtcgatttacagaccggcgaaagc
gccaccattcacgaagagaagctctggctgggtcacccgatctaccgtccgtttgacgac
aataccgttgccttctgccatgagggcccgcacgacctggtggatgcccgcatgtggctg
gtcaatgaggatggcagcaacatgcggaaagtgaagacccatgccgaaggcgaaagctgc
acccatgagttctgggtgccggacggttcggcgctggtctacgtctcctacctgaaggga
gagcagggccgcaccgtctaccgctttgatcccactaccggggttaacgaagcaatcatg
gcgatgcccgcctgctcgcatctgatgagtaactttgacggcaccctgctggtgggcgac
ggttctggctcgccggttgacgtcaacgatgccgacggctatagcatcgataacgatccc
tatatctacgtattcgacgtggcggagaagcgctactaccgcgcggcgcgccacgatacc
tcctgggccacggtagcaaatagtcgccaggtgacccatccgcatccgtcatttacgccg
gacgacagcgcggttctgtttagctccgacaaagacggcaagcctgcgctctatattgcc
cggcttcccgagcagcgtgaatggctacaagcataa
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