Pseudescherichia vulneris: LMA04_16300
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Entry
LMA04_16300 CDS
T08658
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMA04_16300 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_16300 (recC)
Enzymes [BR:
pvj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMA04_16300 (recC)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMA04_16300 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WAH51654
LinkDB
All DBs
Position
3407468..3410836
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AA seq
1122 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEAEMVLVQSTGMAQWLQMTLSQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFNKQSMSWKLMTLLPQMLEQEAFTMLRHYLNDDDD
KRKLFQLSSRVADLYDQYLVFRPEWLTRWEEGGLVDGLGEAQVWQAPLWRALVEHTAALG
QPHWHRANLYQRFINVLESATTAPAGLPSRVFICGISALPPVYLQALQALGKHVDIHLLF
TNPCRYYWGDIKDPAFLSRLIARQRKHHLDAHPVALFREDQPVEGLFNSEGEQEVGNPLL
ASWGKLGRDYIYLLAGMDRYDDLDAFVDITPGALLQNLQYDILELKNSAVAGVTAQEYER
SDGKRRLEREDRSVAVHVCHSPQREVEVLHDRLLAMLEEDPDLSPRDIIVMVADIDSYSP
FIQAVFGSASGERYLPYAISDRRARQSHPALQAFISLLSLPDSRFQSEDVLALLDVPVLA
ARFNIDEEGLRYLRQWVNESGVRWGMDDDNVRELALPATGQHTWQFGLTRMLLGYAMESR
QGEWQSVLPYDESSGLIAELVGHLASLLMQLRLWRKGLAQDRPLAEWLPVCRDMLNDFFL
PDPDTEAALALIEQQWQAVITQGVGAHYDEAVPLSLLRDELAQRLDQERISQRFLAGPIN
ICTLMPMRSIPFKVVCLLGMNDGVYPRALAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQKLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDEELTCDESARRVVDHI
THLHTRMPFDAENFIADELQSYAREWLPAASQQGVAHATFIQELAEEPLETLPFEQLQRF
WAHPVRAFFQMRLKVNFRPEASDIPDAEPFIIDGLDRYQLNQALLNTLVEEEDVEKLFRQ
YRAAGQLPYGAFGEIVWESQHQEMQQLASRVHEHRKPAESMEIELDCGKVHLTGWLQHVQ
EDGLLRWRPSVLKVSQGLQLWLEHLVYCASGGTGESRLFVRNDKAWHFPPLKQNEALKYL
EELVEGYREGMKKPLLLLPESGGAWIKACYDATNDAMLKDEETLAKARSKFLQAYEGNMV
VSGEGEDVWYQRLWRTLEPENYAEIVKQAERYLLPLFRFSQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctatcactccaatcgcctggatgtgttggaagcgttgatggagtttatc
gtagagcgcgaacggctcgacgatccctttgaggccgaaatggtgctggtacagagtacc
ggcatggcgcaatggctacagatgacgctgtcgcaaaagtttggcattgctgccaatatc
gactttccgctcccggcgagctttatctgggatatgtttgtccgcgtgctgccggacatc
ccgaaagagagcgcctttaataaacagagcatgagctggaagctgatgaccctgctgccg
cagatgctggagcaggaggcattcactatgcttcgtcactacctcaatgacgatgatgac
aagcgtaagctgtttcagctctcgtctcgggtagcggatctctacgatcagtatctggtc
tttcgcccggagtggctgacccgctgggaagagggcggtctggtcgacggcctcggtgaa
gcgcaggtctggcaggcaccgctctggcgggcgctggtggagcataccgcggcgctgggg
cagccgcactggcaccgcgccaacctctaccagcgttttatcaacgtgctggagtccgcc
acgacggcacctgccgggctgccctcccgggtcttcatctgcggcatttcggccctgcca
ccggtttatctccaggcgctgcaggcgctgggcaagcatgtggatatccatctgctattt
accaacccctgccgctactactggggggatattaaagatccggcgtttctctcccggctg
attgcccgccagcgtaaacaccatcttgatgcccatccggtggccctgttccgtgaagat
cagccggtagaggggctgtttaatagcgaaggtgagcaggaggtgggtaacccgctgctg
gcctcgtggggcaagctggggcgcgactacatctatctgctggcagggatggatcgctac
gacgatctcgacgccttcgttgatattacgcccggcgcgctgctgcaaaacctgcagtat
gacattctggagctgaaaaacagcgccgtcgccggcgtgacggcccaggagtatgagcgc
agcgacggcaagcgcaggctggagcgggaggaccgcagcgtggcggtacacgtctgtcat
agcccgcagcgggaggtcgaggtgctgcacgatcgcctgctggcgatgctggaagaagat
ccagatctctccccgcgcgacatcatagtgatggtggcggatatcgacagctacagcccc
tttatccaggcggtatttggcagcgccagcggggagcgctatctaccctatgccatctcc
gaccgtcgcgcccgtcagtcgcacccggcattacaggcttttatcagcctgctttcgctg
ccggacagccgcttccagtcggaggatgtactggccctgctggatgtgccggtgctcgcc
gcgcggtttaacatcgatgaagaggggctgcgctatctccgccagtgggtcaacgagtcc
ggcgtgcgctggggcatggacgacgacaacgtccgcgagctggcgctgcccgcgaccggg
cagcacacctggcagtttggcctgacacgtatgctgcttggctacgcaatggagagccgc
cagggcgagtggcagtcggtgctgccctacgatgagtccagcggcctgatagccgagctg
gtgggccatctggcctcgctgctgatgcagctcaggctgtggcgcaaagggctggcccag
gatcgtcccctggccgagtggctgccggtctgccgcgacatgctcaacgacttcttcctg
ccggatcccgataccgaagctgcgctggcgctgattgaacagcagtggcaggcggttatc
acccagggcgttggcgcgcactatgatgaggcggtaccgctctccctgttgcgcgacgag
ctggcgcagaggctcgatcaggagcgcatcagccagcgcttcctcgccgggcctatcaat
atctgtacactgatgccgatgcgctcgatcccctttaaggtcgtctgtctgctggggatg
aacgacggcgtctatccgcgcgcgctggccccgctcggctttgatttgatgagccagaaa
ccgatgcgcggcgaccgtagccgccgggacgatgatcgctacctcttcctggaggcgctc
atctctgcccagcagaagctctacatcagctatatcggacgctcgatccaggataacagc
gagcggttcccgtcggtgctggtacaggagctggtggactatatcgggcagagccactat
ctgcccggcgatgaagagctcacctgcgacgagagcgcgcgacgggtggtggatcatatt
actcacctgcacacccgaatgccgtttgatgcagaaaactttattgccgatgagctgcaa
agctacgcccgggagtggttacctgccgccagccagcagggggtggcccacgccaccttt
attcaggagctggcggaggagccgctggagacgctgccgtttgagcagctgcagcgcttc
tgggcacatccggtgcgggccttcttccagatgcgtctgaaggtgaacttccgccccgag
gcgagcgatattcccgacgccgagccgtttatcattgatggcctggaccgctaccagctt
aaccaggcgctgctcaacactctggtagaggaggaggacgttgagaaactcttccgtcag
taccgcgcagcaggccagctgccctatggcgcgtttggcgaaattgtctgggagagccag
caccaggagatgcagcagctggcctcgcgcgttcatgagcaccgcaagcccgccgagagc
atggagatcgagcttgactgtggcaaggtgcacctgaccggctggctacagcatgtgcag
gaggatggcctgctgcgctggcgtccttcggtgctgaaggtgtcacaggggctgcaactt
tggctggaacatcttgtctactgtgccagcggcggaacgggagagagccggctgtttgtg
cgtaatgacaaagcctggcattttccacccctgaagcagaatgaggcgttgaagtacctt
gaggagctggtcgaaggctaccgggaagggatgaaaaaaccgctgctgctgctaccggaa
agcggtggggcatggataaaagcctgttatgacgcgacaaatgatgcgatgttaaaagac
gaggagacgctcgctaaggcgcggagcaaattcctgcaggcctatgaaggcaacatggtg
gtcagcggcgagggcgaggacgtatggtaccagcgcctgtggcgcaccctcgaacctgaa
aactatgccgagatagtcaagcaggcagagcgttatctcctgccgctctttcgctttagt
cagtcctga
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