Pseudescherichia vulneris: LMA04_16560
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Entry
LMA04_16560 CDS
T08658
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvj03016
]
LMA04_16560 (truD)
Enzymes [BR:
pvj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LMA04_16560 (truD)
Transfer RNA biogenesis [BR:
pvj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMA04_16560 (truD)
Prokaryotic type
LMA04_16560 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
KAsynt_C_assoc
Motif
Other DBs
NCBI-ProteinID:
WAH51700
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All DBs
Position
3470259..3471308
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AA seq
349 aa
AA seq
DB search
MTEFDALTYLHGKPLGSGLLKANPEDFVVVEDLGFAPDGEGEHILVRVLKTNCNTRFVAD
ALAKFLKISAREVSFAGQKDRHAVTEQWLCARVPGKEMPDLSAFQLEGCKVLEYARHKRK
LRLGALKGNQFTLVLREVSDRADVDARLTAIAEQGVPNYFGAQRFGIGGSNLHGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKADFNQVVDGDALQLAGRGSWFVATPEE
LAALQARVDDKALLITAALPGTGEWGTQREALAREEAAISDSPLLQSLLVREKVEASRRA
ALLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtttgacgcactgacgtacctgcacggcaaaccgctgggcagcggcctgctg
aaggccaacccggaagatttcgtcgtggtagaggatttaggcttcgcccctgacggtgag
ggtgagcatattctggtgcgggtgctgaagaccaactgcaatacccgctttgtcgccgac
gcgctggcaaaattcctcaagatctctgcccgggaggtcagcttcgccgggcagaaagac
agacatgcagtgaccgagcagtggctctgcgcccgcgtgccgggcaaagagatgccggat
ctcagcgcgtttcagctggaaggctgcaaggtgctggagtacgcgcggcacaaacgcaag
ctacggctgggcgcgctgaagggcaaccagttcacgctggtgctgcgcgaggtgagcgac
cgcgccgacgtcgacgcgcgtcttacggcaatagcagagcagggcgtaccgaactacttc
ggcgcgcagcgctttggtatcggcggcagcaacctgcacggcgcgctgcgctgggcgcag
agcgatgccccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcccgcagc
gcgttgtttaatcagatcgtcagcgagcgcctgaaaaaagcggactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgcggaagctggttcgtggcgacgccggaagag
ctggcggcgctgcaggcacgcgtcgatgacaaagcgctgctgattaccgctgcgctgccg
ggtaccggcgagtggggaacccagcgtgaggcgctggcgcgtgaagaggcggccattagt
gattcgccgctgttacagtctctgctggtgcgtgagaaggttgaggcctcgcgccgggcc
gcgctgctctatccgcagcagctgagctggaactggtgggatgatgttactgtcgaactg
cgcttctggctgccagccggaagctttgccaccagcgttgtaagggaacttatcaataca
tcgggtgattatgcgaatattgctgagtaa
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