Pseudescherichia vulneris: LMA04_16690
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Entry
LMA04_16690 CDS
T08658
Symbol
uca
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00220
Arginine biosynthesis
pvj00791
Atrazine degradation
pvj01100
Metabolic pathways
pvj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
LMA04_16690 (uca)
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
LMA04_16690 (uca)
Enzymes [BR:
pvj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
LMA04_16690 (uca)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_5
ATP-grasp
HlyD_3
RimK
DUF2118
RnfC_N
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
WAH51724
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All DBs
Position
3496795..3500406
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AA seq
1203 aa
AA seq
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MFTKLLIANRGAIACRILRTLREMNVKGVAVWSESDASSLHIREADEAMSLGEGPAAQTY
LQVDKILAAARESGAQAIHPGYGFLSENAAFAEACEAAGIAFVGPTPEQLRIFGLKHTAR
ALAKSHGVPLLEGTELLADVAEALAAAEGVGYPVMLKSTAGGGGIGMRVCSSPAELAEAF
DAVQRLGKNNFSDAGVFIEKYIERARHLEVQIFGDGAGEVIALGVRDCSVQRRNQKVLEE
TPATALPAGMAEALCRAAIELGKAVSYRSAGTVEFVYDSSAQQFYFLEVNTRLQVEHGVT
EQVWGVDLVQMMIALAAGDLPPLTEIAAGLSPRGHAIQARVYAEDPGREFQPSPGLLTNV
SFPEQDRTTLRIDSWVESGCEVPPFFDPLLAKIITYADTRDEAIDRLDRALNETRLYGVE
TNRQYLRQILRDVPFASGQPWTRCLESLSYQAATLEVISAGTQTTVQDYPGRQGYWAVGV
PPSGPMDDRALRLGNRLLGNADDAAGLEITVSGPTLKFNTDAVAAITGAAISVELEGQPQ
TMNRTFLIRAGMTLKLGDTLEAGVRSYLCLRGGLDVPDYLGSKSTFTLGQFGGHAGRALR
TGDVLHLTPLTDASCGAALPASLHTTLGAVRELRVIYGPHGAPEYFTPEWIPTFFATEWE
VHFNSSRTGVRLIGPKPEWARDSGGEAGLHPSNIHDNPYAIGAVDFTGDMPVILGPDGPS
LGGFVCPVTVIEADLWQLGQLNAGDRVRFVPVDIATARLLAQGRSQELASLQPVAVNWQM
QPLSSPVVMETGAADKRLVARLSGDTHLLLEIGDAELDLVLRFRGHALMQALEALALDGV
IDLTPGIRSLQVHYQPEALTLSHLLAIVREVWQSVCQQEDLQVPSRVVWLPLSWDDPACQ
KAIDKYMTTVRRDAPWCPSNLEFIRRINDLGNIDEVYRTVFDASYLVMGLGDVYLGAPVA
TPLDPRHRLVTTKYNPARTWTAENSVGIGGAYLCVYGMEGPGGYQFVGRTLQMWSRYHAV
EDFGGKPWLLRFFDQIRFYPVSAEELLTIRRDFPLGRYPLRIEQSTLRLAEYQQFLAEEA
TSIEAFRTHQQAAFNAERERWVASGQAHFDSNDAMPDVGDDAPLQAGQRGIDSPIAGNLW
QVLVKPGDRVKEGDVMVILESMKMEIPLRATCNGVVDQVRVQPGSSVRAGQCVAVVNAER
AVA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaaattactcattgctaaccggggcgctatcgcctgccgtatcctgcgcacc
ctgcgggagatgaacgtgaaaggggtggcggtctggtcggagtccgatgccagcagcctg
catattcgcgaagccgacgaggcgatgagcctgggcgaaggcccggcggcgcaaacctac
ctgcaggtggataagatcctcgccgccgcccgggagagcggggcgcaggccatccacccc
ggctacggcttcctgtcggaaaacgccgcctttgccgaggcgtgtgaggccgccgggatc
gccttcgttggcccgactcctgagcagctgcgcatttttggtctgaagcataccgctcgc
gcgctggcgaaaagccacggcgtgccgctgctggagggcaccgagctgctggccgacgtc
gccgaagcgctggctgcggcagagggcgtcggctatccggtgatgctcaagagcacagcg
gggggcggcggcatcgggatgcgcgtctgctctagcccggcggagctggcggaggctttc
gacgcggtgcagcggctggggaaaaacaacttcagcgatgcgggcgtctttatcgagaag
tacatcgagcgcgcccgtcatctggaggtacagatctttggcgacggtgcaggggaggtg
atcgccctcggcgtgcgcgactgctcggtgcagcggcgtaaccagaaggtgctggaggag
actcccgccacggcgctgcctgcaggaatggccgaggcgctctgccgggccgctatcgag
ctgggcaaggcggtgagctaccgcagcgccgggacggtggagtttgtctacgacagcagc
gcgcagcagttctacttcctggaggttaatacccggctacaggtggagcatggcgtcacc
gagcaggtgtggggcgtggatctggtccagatgatgatcgcgctggccgcaggcgatctg
ccgccgctgacggagatcgctgctgggctaagcccgcgcggccatgcgatccaggcccgc
gtctacgccgaggatccgggccgtgagttccagccctcaccgggcctgctgaccaacgtg
agcttcccggagcaggatcgcaccacgctgcgcatcgacagctgggtagagtccggttgc
gaggtgccgccgttcttcgatccgctgctggccaagatcattacctacgctgacacccgc
gacgaggcgatcgatcggctggatcgcgccctgaatgagacgcgcctctatggcgtcgag
accaaccgtcagtacctgcggcagatcttgcgcgacgtcccctttgccagcggccagccg
tggacccgctgccttgagagcctgagctaccaggcggcaacgctggaggtgatcagcgcc
gggacgcagaccacggtgcaggactatccgggacgacagggctactgggcggtaggcgtg
ccgccatccggtccgatggacgatcgcgccctgcgtctcggcaaccgtctgctgggcaat
gccgacgatgcggcggggctggagatcaccgtcagcggcccgaccctgaagtttaatacc
gatgcggtggcggcgatcaccggcgcagcgataagcgtcgaactggagggccagccgcag
acaatgaaccgtaccttcctcattcgcgccggtatgacgttgaagctgggggatactttg
gaagcgggcgtgcgcagctacctctgcctgcgtggtggcctcgacgtgccggactattta
ggcagcaagagtacctttaccctcggccagtttggcggccacgccgggcgcgctctgcgt
acaggggacgtgctgcacctgacgccgttaaccgacgccagctgtggtgcggctctgcct
gcgtcgctgcacacgacccttggggcggtgcgcgagctgcgggtgatctacggcccacac
ggtgcgccggagtactttacgcccgaatggatccccaccttttttgctaccgagtgggag
gtgcacttcaactccagccgcaccggcgtacgcctgattggcccgaaaccggagtgggcg
cgggacagcggcggcgaggcggggctgcatccttcgaatattcatgataacccctacgct
atcggcgcggtggattttaccggcgatatgccggtgatccttggaccggacggcccgagc
ctcggcggcttcgtctgcccggtaacggtcatcgaggcggatctctggcagcttggccag
cttaacgccggggatcgggtgcgcttcgtgccggtggatatcgccaccgcccgcctgctg
gcgcaggggcgcagccaggagctggcgagcctccagccggtggcagtcaactggcagatg
cagccgctcagctctccggtagtgatggagaccggggcagcggacaagcggctggtggcg
cgcctctccggcgatacccatctgctgctggagattggcgatgccgagctggatctggtt
ctgcgctttcgcggccacgccctgatgcaggccctggaggcgctggcgctcgacggcgtg
atcgatctgacgccgggcatccgctcgttacaggtgcactatcagccggaggcgctgacg
ctgtcgcacctgctggcaatcgtgcgtgaagtgtggcagtcggtatgccagcaagaggat
ctgcaggtgccgtcgcgcgtcgtctggctgccgctgtcgtgggacgatccggcgtgccag
aaagccatcgataagtacatgaccaccgtgcgccgggatgccccctggtgtccgagcaac
ctggagtttattcgtcgcatcaacgatctgggtaacatcgatgaggtctaccgcacggtg
tttgacgccagctatctggtcatggggctgggggatgtctatctcggtgcgccggtggcg
acgccgctcgatccgcgccatcggctggtgacgaccaaatataacccggcgcgcacctgg
acggcggagaactcggtgggtatcggcggggcgtacctctgcgtctacggcatggagggg
ccgggaggctaccagttcgtcggacgcacgttacagatgtggagccgctatcatgcggtc
gaggatttcggcggcaagccgtggctgctgcgcttctttgaccagatccgtttctacccg
gtctccgccgaggagctgttgaccattcgccgcgacttcccgctcgggcgctatccgctg
cgcattgagcagagcacgctgcggctggcagagtaccagcagttcctcgccgaagaggcg
accagcattgaggccttccgtacccatcagcaggcggcgtttaatgccgaaagagagcgc
tgggtggcctccggccaggcgcactttgacagtaacgacgccatgccggacgttggcgac
gatgcgccgctgcaggcgggtcagcgtggcatcgacagccccattgccggtaatctctgg
caggtgctggtcaagccgggcgacagggtaaaagagggggacgtgatggtgatcctggag
tcgatgaagatggagatcccgttgcgggccacctgcaatggcgttgtggaccaagtccgg
gtacagccgggatcgtcggtgcgggctgggcagtgcgtggcggtggttaatgccgagcgc
gccgtggcttag
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