Pseudescherichia vulneris: LMA04_17125
Help
Entry
LMA04_17125 CDS
T08658
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LMA04_17125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvj02000
]
LMA04_17125
02044 Secretion system [BR:
pvj02044
]
LMA04_17125
Transporters [BR:
pvj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LMA04_17125
Secretion system [BR:
pvj02044
]
Type I secretion system
Adhesin protein transporter
LMA04_17125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
DUF87
AAA_21
SMC_N
RsgA_GTPase
AAA_10
MMR_HSR1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WAH51804
LinkDB
All DBs
Position
3598493..3600625
Genome browser
AA seq
710 aa
AA seq
DB search
MQQPDTESWINVMVRAAGRFGLPADAPAVRQQMRWFESLPLNARLERLSGLMGLQVRVVE
LEKMRWNAQNLPVIVQLESGELMLLETIDADGVVAYWLSEGGDLVREEALETLLTRVKPE
VVMLGIAARGRDSRIDDFTRPWEEHWFWRHFRHAKRKLSEIALASVLGNVLALAGILFSM
QVYDRVIPAQSIPTLWVLFIGVLFAALLEFMIRLARTHVSDIMGKHIDLNVSSLFFARAM
AIKNDARPKSTGSFISQLREIDQVRELLTSTTVGAAMDIPFVLLFLGIMALVGGPLVVIP
LIAIPLIVIPGILVQWPMAKLAKEGMRESAIRNAVLVESIEGVEDIKALQAEPYFQRQWE
HTHAVGANIGMKQRVWGARLSGWASTVQQITYAGMLVFGCYLVMEGNITTGTLVACSLLS
SRTIAPLMQLTMVFSRWQHAKMAMNGLDDLLKKPLDKSADQKMAHCPVLAGHYQVQKVQY
SYDPEKGDQAAQIDGLEIKPGERVAILGKTGAGKSILLKLLSGQAQASKGKVIIDGVDMA
HIDPMDVRRQVGYLSQDSRLFFGTLRQNLMLGHPHATEAELIQALRISGAIGMVQQDAAS
LDRLINEGGRGLSGGQRQMVLLSRLIVRNPQIVLLDEPTASMDEQLEAWVIRQLQQWLTG
RTLVLVTHRPALLNLVDRIVVMENGKVIADGPRDTLLQQAARNSNVASVA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagccggataccgagagctggatcaatgtcatggtgcgtgcggcagggcggttt
ggcctgccagcggatgcgcctgccgtacgccagcagatgcgctggtttgagagtttgccg
cttaatgcgcggctggagagattaagcggcctgatggggctccaggtacgcgtagtggag
ctggagaagatgcgctggaatgcgcaaaacctgccggtcatcgtgcagctggagtccggc
gagctgatgctgctggagactatcgacgccgacggagtggtggcctactggctgagcgag
gggggcgatctggtgcgcgaagaggcgctggagacgctgctcacccgcgtcaagccggag
gtagtgatgctcggcatcgccgcccgcgggcgcgactcccgcatcgatgactttacccgt
ccctgggaggaacactggttctggcggcacttccgccacgccaaacgcaagctctcggag
atcgcccttgcctcggtgctgggcaacgtgctggccctggcgggaatcctcttctcgatg
caggtctatgatcgggttattcccgcccagtcgatacccaccctgtgggtgctgtttatc
ggcgtgctgttcgccgccctgctggagtttatgatccgcctggcgcgcacccatgtctct
gacatcatgggcaagcatatcgacctcaacgtctcgtcgctcttttttgcccgggcgatg
gcgatcaaaaacgatgcccgacccaaatccaccggctcgtttatctctcagctgcgtgag
atcgaccaggtgcgcgagctgctcacctcgaccaccgtcggcgcggcgatggatattccc
tttgtcctgctgttcctcggcattatggcgctggtaggcggcccgctggtggtcatcccg
ctgatcgccattccactgattgtgatcccagggatcctcgtccagtggccgatggcgaag
ctggcgaaagaggggatgcgtgagagcgcgatccgtaacgcggtgctggtggagtccatc
gagggcgtcgaagatatcaaggccctgcaggccgagccgtatttccagcgtcagtgggag
catacccacgccgtgggggccaacatcggcatgaaacagcgcgtctggggagcgcggctg
agcggctgggcctctaccgtccagcagatcacctatgccgggatgctggtgttcggctgc
tatctggtaatggaaggaaacatcacgaccggtacgctggtggcctgtagcctgctctcg
tcacgcactatcgcgccgctgatgcagctgactatggtcttctcccgctggcagcacgcc
aaaatggcgatgaacggcctcgacgatctgctcaagaagccgctggataagagcgccgat
cagaaaatggcccactgcccggtgctggccggtcactaccaggtgcagaaggtgcagtac
agctacgatcccgagaagggcgatcaggcagcgcagatcgacggcctggagatcaagccc
ggcgagcgggtggcaatcctcggcaagaccggtgcaggcaaatcgatcctgctgaagcta
ctgtcaggccaggcgcaggccagcaaggggaaggtgattatcgacggcgtcgatatggcg
cacattgacccaatggatgttcgccgtcaggtaggctacctctcccaggattcgcgcctc
tttttcggcacgctgcggcagaacctgatgctgggccatccgcacgctaccgaggcggag
ctgatccaggccctgcgcatcagcggcgcaatcggcatggtgcagcaggatgccgccagc
ctcgaccggctgattaacgagggggggcgcggcctctccggcggccagcggcagatggtg
ttgctcagccgcctgatcgtacgtaacccgcagattgtgctgctcgatgaacccaccgcg
tcaatggatgagcagctcgaggcgtgggtgatccgccagctgcagcagtggcttaccgga
cgcacgctggtgctggtaacccatcgccctgcgctgctgaatctggtggaccggattgtg
gtgatggagaacggcaaggtgattgccgatgggccgcgcgacacgctgcttcagcaggcg
gcgcgtaacagcaacgtggcatcggtagcctga
DBGET
integrated database retrieval system
