Pseudescherichia vulneris: LMA04_17260
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Entry
LMA04_17260 CDS
T08658
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvj03009
]
LMA04_17260 (rluD)
Enzymes [BR:
pvj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LMA04_17260 (rluD)
Ribosome biogenesis [BR:
pvj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LMA04_17260 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
TTC3_9th
TruB_N
Motif
Other DBs
NCBI-ProteinID:
WAH51828
LinkDB
All DBs
Position
3623078..3624058
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AA seq
326 aa
AA seq
DB search
MAQLVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVQVNGKICDKPKEKVL
GGERVAINAEIEEEARFEPQDIPLNIVYEDDDILVINKPRDFVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQLREITREYEAVAIGHMT
AGGTVEEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHITHPLVGDQLYGGRPRPPKGASDEFITALRQFDRQALHATMLRLYHPITGIEMEWHAP
IPQDMIDLIDAMRADFETHKEDVDWL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcacaactagtacaactcaccgcaacggtgtccgaaaatcaactcggtcaacgctta
gatcaggcattggccgaaatgttcccggattattcacgttcgcgcataaaagagtggatc
cttgaccagcgcgtgcaggtcaacggcaaaatctgcgacaaacccaaagagaaagtattg
gggggcgagcgcgtcgccatcaatgccgagatcgaagaagaggcgcgctttgagccgcag
gatatcccgctcaacatcgtctatgaagatgacgatattctcgttatcaacaagccgcgc
gacttcgtggtgcatccgggcgcaggtaaccctgacggcaccgtactgaatgcgctgctg
cactactatccgccgatcgctgacgtgccgcgcgcgggtatcgtgcaccgtctggataaa
gacactaccggcctgatggtggtcgctaagacagtaccggcccagacccggctggtggag
tccctgcagctgcgcgaaatcacccgtgagtatgaggccgttgccatcggtcatatgacg
gcgggcggtacggtggaagagccgatcagccgccacccgaccaagcgtacccacatgtcg
gtgcatccgatgggcaagcctgcggtgacccactaccgcattatggagcacttccgtgtg
cacacgcgtctgcgcctgcgtcttgagacaggccgtacgcaccagatccgtgttcacatg
gcgcacattacccatccgctggtgggcgatcagctctacggtggccgtccacgtccgccg
aagggggcatctgatgagtttatcactgccctgcgtcagttcgatcgccaggcgctgcac
gccactatgctgcgtctctatcacccgattaccggtattgagatggagtggcatgcgcca
atcccacaggatatgatcgatctgatcgacgccatgcgcgccgatttcgaaacccataaa
gaggacgttgactggctatga
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