Pseudescherichia vulneris: LMA04_17485
Help
Entry
LMA04_17485 CDS
T08658
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj00260
Glycine, serine and threonine metabolism
pvj00460
Cyanoamino acid metabolism
pvj00630
Glyoxylate and dicarboxylate metabolism
pvj00670
One carbon pool by folate
pvj00680
Methane metabolism
pvj01100
Metabolic pathways
pvj01110
Biosynthesis of secondary metabolites
pvj01120
Microbial metabolism in diverse environments
pvj01200
Carbon metabolism
pvj01230
Biosynthesis of amino acids
pvj01240
Biosynthesis of cofactors
pvj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMA04_17485
09102 Energy metabolism
00680 Methane metabolism
LMA04_17485
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LMA04_17485
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LMA04_17485
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LMA04_17485
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LMA04_17485
Enzymes [BR:
pvj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LMA04_17485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
OKR_DC_1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WAH51867
LinkDB
All DBs
Position
3674073..3675326
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN
LAQGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYEDMAKQAKEHKPKMIIGGFSAYSGI
VDWAKMREIADSIGAYLFVDMAHVAGLIAADVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFKEAEVAELAGWMCDVLDNINDEAVIESTKQKVLAICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcaggcgatggag
caagagaaagtacgtcaggaagagcacattgagctgatcgcctccgaaaactacaccagc
ccgcgcgttatgcaggctcagggttctcagctgactaacaaatatgccgaaggctatccg
ggcaaacgctactacggcggctgcgaatacgttgacgtggttgagcagctggctatcgac
cgtgccaaagcgctgtttggcgcagactacgcgaacgtgcagccgcactctggctcccag
gctaacttcgcggtctacaccgcgctgctgcaaccgggcgataccgtgctggggatgaac
ctggcgcagggcggtcacctgactcacggctccccggttaacttctccggcaaactgtac
aacatcatcccttacggtattgatgagtccggtaaaattgattacgaagacatggcgaag
caggctaaagagcacaagccgaagatgatcatcggtggtttctctgcttattccggtatc
gttgactgggcaaaaatgcgtgaaatcgccgacagcattggtgcttacctgtttgttgat
atggcgcacgttgcgggtctgattgccgcagacgtttatccgaacccggttccgcacgcg
cacgttgtgaccaccaccacccacaaaaccctggcgggcccgcgtggcggcctgatcctt
gctaaaggcggtgatgaagagctgtacaaaaagctgaactccgctgtcttcccaagcgcg
cagggcggcccgctgatgcacgttatcgcggcaaaagcggttgcgctgaaagaagcgatg
gagccagagttcaaggtttaccagcagcaggttgccaaaaacgctaaagcgatggtggag
gtgttcctgaaccgtggctacaaagtggtgtctggcggtaccgagaaccacctgttccta
ttggatctggttgataagaacctgaccggtaaagaagctgacgctgccctgggccgcgcc
aacatcaccgtcaacaaaaacagcgtgccaaacgatccgaagagcccgtttgtgacgtcc
ggtatccgtatcggttctccggctgtgactcgccgcggctttaaagaagcggaagtggca
gagctggctggctggatgtgtgacgtgctggacaacatcaacgacgaagcggtcattgaa
agcactaaacagaaagtgctggctatctgcgctcgcttcccggtttacgcataa
DBGET
integrated database retrieval system