Pseudescherichia vulneris: LMA04_19325
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Entry
LMA04_19325 CDS
T08658
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pvj
Pseudescherichia vulneris
Pathway
pvj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMA04_19325 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_19325 (nfo)
Enzymes [BR:
pvj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LMA04_19325 (nfo)
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LMA04_19325 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WAH52211
LinkDB
All DBs
Position
complement(4039278..4040135)
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AA seq
285 aa
AA seq
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MKFIGAHVSAAGGVANAAVRAAEIGATAFALFTKNQRQWRAAALSGATINEFKAACEKHR
FGPGQILPHDSYLINLGHPVAEALEKSREAFIDEMQRCEQLGLTLLNFHPGSHLMQIPED
ECLSRIAESINIALDKTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRGSEACEKTFAEFDRIVGFHYLRGMHLNDAKSAFASRVDRHHSLGEGNIG
HEAFSWIMQDARFNGIPLILETINSDIWDEEIAWLKAQQVQTATV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattggcgcgcatgttagcgcggcgggcggcgtggcaaatgccgccgtacgt
gcggcagagatcggggctaccgcctttgccctgtttaccaaaaaccagcgccagtggcgg
gcggcggcgctaagtggcgcgacaatcaacgagtttaaggccgcctgcgaaaaacaccgc
tttggtccgggccagatcctgccccacgacagttatctgattaatctggggcacccggta
gccgaagcgctggagaagtcccgggaagccttcattgatgagatgcagcgctgcgagcag
ctggggctcaccctgctgaacttccaccccggtagccacctgatgcagatcccagaggat
gaatgcctgtcgcgcatcgccgagtcgatcaacatcgcgctggataaaaccgagggcgtc
acggcggtgattgagaataccgcaggccagggcagcaacctcggctttaagtttgagcac
ctggcggcaattattgacggcgtagaggataagtcccgcgtcggcgtctgcatcgatacc
tgccatgcctttgcggcggggtacgatctgcgcggcagcgaggcctgtgaaaaaaccttt
gctgagtttgatcgcatcgtcggcttccactatttacggggaatgcacctcaacgatgcc
aaaagcgcctttgccagccgcgttgaccgccaccacagcctgggcgaaggcaatattggc
cacgaggcctttagctggatcatgcaggacgcccgcttcaacggtattccgctgatcctc
gagaccattaactcagatatctgggatgaagagattgcgtggctgaaggcgcagcaggtg
cagacagcgacggtttga
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