Pseudescherichia vulneris: LMA04_20130
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Entry
LMA04_20130 CDS
T08658
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvj03400
]
LMA04_20130
DNA repair and recombination proteins [BR:
pvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LMA04_20130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
WAH52352
LinkDB
All DBs
Position
4220790..4221287
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AA seq
165 aa
AA seq
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MADVHDRATRSKNMRAIGTRDTAIEKRLAALLTACGLTFRVQDAALPGRPDFVVDDYRCV
IFTHGCFWHHHDCYLFKVPATRTEFWLEKIGKNVERDRRDCARLLAEGWRVLVVWECAIR
GRARLSDTALSERLEEWICSGGAAAQIDTRGIQARGLATSLPDRA
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtacacgatagagccacgcgcagcaaaaatatgcgtgccatcggtacccgg
gatacggcgattgaaaaacggcttgccgcgctgcttaccgcgtgcgggctgacgtttcgc
gttcaggatgcagcgcttcccggcaggcccgattttgtcgttgatgactaccgctgcgtg
attttcacccacggctgcttctggcaccatcatgactgctatctctttaaggtccccgcg
acgcgtaccgaattctggctggagaagattggcaaaaacgtcgaacgcgatcggcgtgat
tgcgctcgactgctggcggagggctggcgggtgctggttgtctgggagtgtgcgatccgc
ggtagggccaggctaagcgatacggcgctcagcgagcggcttgaagagtggatctgcagc
ggcggggcggccgcgcagatcgacacgcgtggtattcaggcccgtggcctggctacttct
ctgcctgacagggcgtaa
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