Pseudescherichia vulneris: LMA04_21945
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Entry
LMA04_21945 CDS
T08658
Symbol
tet(D)
Name
(GenBank) tetracycline efflux MFS transporter Tet(D)
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvj02000
]
LMA04_21945 (tet(D))
01504 Antimicrobial resistance genes [BR:
pvj01504
]
LMA04_21945 (tet(D))
Transporters [BR:
pvj02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LMA04_21945 (tet(D))
Antimicrobial resistance genes [BR:
pvj01504
]
Gene variants
Tetracycline resistance genes
Transporters
LMA04_21945 (tet(D))
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
AgrB
Motif
Other DBs
NCBI-ProteinID:
WAH54619
LinkDB
All DBs
Position
unnamed:complement(183286..184470)
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AA seq
394 aa
AA seq
DB search
MNKPAVIALVITLLDAMGIGLIMPVLPSLLREYLPEADVANHYGILLALYAVMQVCFAPL
LGRWSDKLGRRPVLLLSLAGAAFDYTLLALSNVLWMLYLGRIISGITGATGAVAASVVAD
STAVSERTAWFGRLGAAFGAGLIAGPAIGGLAGDISPHLPFVIAAILNACTFLMVFFIFK
PAVQTEEKPAEQKQESAGISFITLLKPLALLLFVFFTAQLIGQIPATVWVLFTESRFAWD
SAAVGFSLAGLGAMHALFQAVVAGALAKRLSEKTIIFAGFIADATAFLLMSAITSGWMVY
PVLILLAGGGIALPALQGIISAGASAANQGKLQGVLVSLTNLTGVAGPLLFAFIFSQTQQ
SADGTVWLIGTALYGLLLAICLLIRKPAPVAATC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacccgctgtcatcgcgctggtgattacactgctggacgcgatgggaattggt
ctgatcatgccggtattaccgtcactgctgcgggaatatctcccggaagcggatgtggca
aaccattacggcattctgctggcgctgtatgcggtgatgcaggtctgttttgctccgctg
ctgggcagatggtcagataagctggggcgcagaccggtgctgctgttatccctggcgggt
gccgcgtttgattacacactgctggcactgtccaatgtgctgtggatgttgtatctcggg
cggattatctccgggatcactggtgccaccggcgcggttgcggcttcggtagtggcggac
agcacggcggtcagcgagcgtaccgcctggttcggccgtctcggtgcggcctttggtgcc
gggctgattgccgggccggctatcggcggactggcgggggatatctcaccgcatctgccg
tttgtcattgcggcaatactgaatgcctgcacctttctgatggtcttttttatctttaaa
ccggcggtacagacagaagaaaaaccggcggagcagaaacaagaaagcgcaggtatcagc
tttatcacactgcttaaacctctggcgctgttgctgtttgtcttttttaccgcgcagctt
atcgggcagatcccggccactgtctgggtattgtttacggagagccgctttgcctgggac
agcgcggcggtcggtttttcactggcgggactcggggcgatgcatgcactgtttcaggcg
gtggttgccggggcgctggcaaaacggctgagtgagaaaaccattattttcgccggattt
attgccgatgccaccgcgtttttactgatgtctgctatcacttccggatggatggtgtat
ccggtcctgatcctgctggcaggcggcggaattgcactgcctgcattgcagggcattatc
tctgccggggcatcggcggcaaatcagggaaaactacagggtgtgctggtcagcctgacc
aatctgaccggcgtggcgggcccgctgctgtttgcttttattttcagtcagacacagcag
agtgcggacggtacggtgtggctgattggcacggcactgtacggtctgctgctggcaatc
tgtctgctgatcagaaaaccggcaccggtggcggccacctgctga
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