KEGG   Pseudomonas viciae: EPZ47_00175
Entry
EPZ47_00175       CDS       T07167                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pvk  Pseudomonas viciae
Pathway
pvk03030  DNA replication
pvk03410  Base excision repair
pvk03420  Nucleotide excision repair
pvk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EPZ47_00175 (polA)
   03410 Base excision repair
    EPZ47_00175 (polA)
   03420 Nucleotide excision repair
    EPZ47_00175 (polA)
   03440 Homologous recombination
    EPZ47_00175 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvk03032]
    EPZ47_00175 (polA)
   03400 DNA repair and recombination proteins [BR:pvk03400]
    EPZ47_00175 (polA)
Enzymes [BR:pvk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EPZ47_00175 (polA)
DNA replication proteins [BR:pvk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EPZ47_00175 (polA)
DNA repair and recombination proteins [BR:pvk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EPZ47_00175 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EPZ47_00175 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 Obc1_cap WHD_BrxR GPAT_N
Other DBs
NCBI-ProteinID: QBZ87194
UniProt: A0A4V1CA02
LinkDB
Position
35463..38231
AA seq 922 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYAQLDIVATLPIRGAKTLAAKLEEHKEM
ALLSYELATIKTDVPLDVGLDDLQMGQPDHEKLAELYTLLEFKSWFEDNQRDAKRSGQEI
VEVSDEQPGAAEAKYEVILDQAHFDTWLAKLDKAPLFAFVTETNGGDAQHSQLVGLSFAV
APFEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLENPNKLKVGQHAKFETNILANCAIGG
DQNNGILVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQDIAGKGVKQLTFD
QISLELAGPYAAEDADVTLRLHQALQEKLAATPSLGKVLTEIEMPLMPVLARIERQGALV
DANLLGVQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVELEAVTHDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLAYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLSASGLDAKVILQVHDELVLEVREDLVDQVREEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgagccaagcacccctcgtcctggtggacggttcttcttatctgtaccgcgcctttcac
gcgctgccaccgctgaccacttccaaaggcctgccgaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtatccggacagtccgttcgccgtggtgttcgac
gccaagggtgggacgtttcgcgatgcgctgtacgccgaatacaaggccaaccgcccgagc
atgcccgacgacatgcgcgtgcagatcgagccgctgcatgccagcgtcaaggccctgggc
ttcccgctgctgtgcgtggacaacgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggcggccgatcgtccggtggtgatctccaccggcgacaaagacatggcgcaa
ctggtcgacgggcacattaccttggtcaataccatgaccggtagcgccctggacgtggct
ggcgtgaaggagaagtttggcgtcgctcccgagcagatcatcgattatctggcgttgatg
ggcgattcgtccgacaacatcccgggcgttccgggcatcgggccgaagaccgcgtctggt
ctgctggtgggcgtcaatggcggtctgaccgagctgtacgcacaactggacatcgtcgcc
acgttgccgatccgtggcgccaagaccctggccgccaagctcgaagagcacaaggaaatg
gctttgctttcctatgagctggcgaccatcaagactgatgtgcctttggatgtcggcctc
gacgacctgcaaatgggccagccggaccacgaaaaactcgccgagctgtataccctgctg
gaattcaagagctggttcgaagacaaccagagggacgccaagcgctccggccaggagatc
gtcgaagtcagcgacgaacagccgggtgccgccgaggctaaatatgaggtcatccttgat
caggcacatttcgatacctggctggccaaactcgataaagcgccgctgtttgccttcgtc
accgaaaccaacgggggcgatgcccaacattcgcagctcgtcggcttgtcgttcgccgtt
gcaccgtttgaggccgcctacatcccgctgacccattcctacatgggcgtgccggagcaa
ctggaccgcgacacggtgctcaaggccctcaagccgttgctggaaaacccgaacaagctc
aaggtcggccagcacgccaagtttgaaaccaacatcctggccaactgcgccatcggcggt
gaccagaacaatggcattttggtgcaaggcatcgccttcgacaccatgctcgagtcctac
gtactggactccacggcgacccgtcacgacatggacagcctggcgctcaagtacctgggc
caaagcaagaccgatttccaggacatcgccggcaaaggcgtcaaacagctgacttttgac
cagatatccctggaactggccggtccttacgccgctgaagatgccgacgtgaccttgcgc
ctgcaccaggccttgcaggaaaaactggccgccacgccaagcctgggcaaagtgctcacc
gaaatcgaaatgccgctgatgccggtcctggcacgcatcgagcgccagggtgcgctggtc
gatgccaacctgctgggcgtgcagagtgtcgagttgggcgagaaactggtggcgctggag
cgtgaagcgtttgccatcgccggcgaggaattcaacctgggctcgccgaagcagttgggc
gtgatcctgtatgaaaaactcggcttgccagtgctcagcaaaaccgccaagggccaggcg
tctactgccgaagcggtgctcgccgaactggcggagcaggattaccccctgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgatcgtctgccggag
cagatcaacagccgcaccggccgcgtccataccaattaccagcaagccgtcgccgcgacc
gggcgactgtcgtccatcgacccgaacctgcagaacattccgattcgcactgccgaaggc
cggcgcattcgccaggcattcgtcgcgcccaaaggctacaagctgttggcggcggactac
tcgcagatcgaattgcggatcatggcgcacctggccaaggatgaaggtctgctccatgcg
tttcgcaatgatctggacgtgcaccgggccacggccgccgaggtattcggcgttgagctg
gaggccgtcacccacgaccagcggcgcagcgccaaggcgatcaacttcggcttgatctat
ggcatgagcgcctttggcctggccaagcagatcggcgttgatcgcaagcagtcccaggct
tacatcgaccgctacttcgcgcgctacccgggtgtgctggcctacatggagcgcacccgc
gcccaggcagccgagcagggtttcgtcgaaaccatattcggtcgtcggttgtacctgccg
gacatcaacgcgaaaaacccggccctgcgcaaaggcgccgagcgcacggcgatcaacgcg
ccgatgcaaggcaccgccgccgacatcatcaagaaagccatggtggcggtggaccgctgg
ctgagcgcgtcagggttggatgccaaagtcatcctgcaggtacacgacgaattggtgctg
gaagtgcgcgaggatctggtcgaccaggtgcgcgaggaaattcgccagcacatgagcgcc
gccgccacgctggatgtgccgctgctggtggaagtgggtgtgggcaataactgggatgag
gcccactga

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