Pseudomonas viciae: EPZ47_00545
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Entry
EPZ47_00545 CDS
T07167
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pvk
Pseudomonas viciae
Pathway
pvk02025
Biofilm formation - Pseudomonas aeruginosa
pvk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EPZ47_00545 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EPZ47_00545 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvk02044
]
EPZ47_00545 (tssH)
Secretion system [BR:
pvk02044
]
Type VI secretion system
Imp/Vas secretion system core components
EPZ47_00545 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
AAA_16
ClpB_D2-small
AAA_7
nSTAND3
NACHT
AAA_25
Sigma54_activat
AAA_29
IstB_IS21
NBD_SMAX1
T2SSE
AAA_24
Clp_N
Hpr_kinase_C
SLFN-g3_helicase
FliJ
Motif
Other DBs
NCBI-ProteinID:
QBZ87264
UniProt:
A0A4V1CA09
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All DBs
Position
118594..121176
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AA seq
860 aa
AA seq
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MINVDLQQLIQALDADTRSDLERSAERCVVRGANKVLVEDLLQGLLERPQGLLARALQDA
QLSASELSAALQPRTEHSASRNPIFAPELVQWLQDALLVANLELGQSQVGQAALNLALLR
NPIRHAGSYYQVLLSRLNVDRLKDFALSQQVQPVAGQFAVPGDSLLERFTHNLTQQARDG
QLDPVLCRDGEIRQMIDILVRRRKNNPIVVGEAGVGKTAIVEGLALRIAAGEVPSVLEGV
ELLSLDMGLLQAGASIKGEFERRLKGVIDGVKASPKSIILFIDEAHTLIGAGGNAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSDAVTILRGLAQ
VYEASHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPQSLERL
RGEWTEGERQRHALRRDARAGLLIDLLELEALEGRLDGIEDECRVLEIQWTEQRILAERL
LSLRQQLARAREAAVDQALCVETLEAALSETHSALMEAQVQGRLVSFEVCPRLVAEVIGA
WTGIPLAQLAREHNVKVASFAADLRTRIRGQEQAVQALDRAMRATAAGLNKPDAPAGVFL
LVGPSGVGKTETALALADLLYGGDRFITTLNMAEFQEKHTVSRLIGAPPGYVGFGEGGML
TEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGLANDGEGREIDFRNVLILMTSNLGS
ERISELCENGAQPNAERLEEAIRPILSKHFKPALLARMCVVPYYPVSGSVLRELVEIKLD
RLGGRLHRRQLTFSYCGRLVDHLVERCARSDGGARLIDHLLDLHLTPRVADRLLAAMAAG
EQLRHVHATLSGDAVACEFN
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagaccttcagcaactcattcaggcgctggacgccgacaccaggagcgac
ttggaacgttcggccgagcgctgcgtggtccgtggcgcaaacaaggtcctggtggaagac
ttgttgcagggtctgctggaacgaccgcaaggtctgctcgcccgtgctttgcaggatgcc
cagctaagcgcaagcgagctgagcgccgcgctgcaaccgcgtactgagcatagcgcctcg
cgcaacccgatatttgcccctgagctggtgcagtggctgcaagatgcgttgctggtggcc
aatctcgaactgggccagagccaggtcgggcaagcagccttgaacctggcgttgctgcgc
aatccgatccgccacgcgggcagctattaccaagtgttgcttagccggctgaacgtcgac
cggctgaaagatttcgccttgtcacaacaggtacaaccggttgccggtcaattcgccgtg
ccaggcgactccctgctggagcgcttcactcataacctgacccagcaggcccgcgatggc
caactcgacccagtgctttgtcgggacggtgagatcaggcagatgatcgatatcctcgtt
cgtcgccgcaaaaacaatcccatcgtggtcggtgaagcgggggtgggcaagaccgctatc
gtcgaaggcctggccttgcgcatcgccgccggggaggtaccgtcagtactcgaaggtgtc
gaattactgtcgttggatatgggactgctgcaggccggagccagcatcaagggcgaattc
gagcgtcgcctcaaaggtgtgatcgacggcgtcaaggcttcgccaaaatccatcatcctg
ttcatcgacgaagcccacaccttgatcggtgcgggtggcaatgctggtggttctgacgcg
gccaacttgctcaagccggccctggcccgaggcgaactacggactatcgcggccactacc
tgggctgagtacaaaaaatactttgagaaagacccggccctggctcgtcgtttccagcca
gtgcagttgcacgagccgaccgtcagtgacgcggtgaccatcctgcgtggtctggcccag
gtctacgaggccagtcacggtatttacctgcgtgatgatgcggtggttgcggcggcgcaa
ttgtccgcccgctatctggctggtcgtcaactgccggacaaggccgtcgatgtgctcgac
actgcatgcgcgcgcgtgcgcatcagtttggccgctgcgccacaaagcctcgagcgactg
cgcggcgaatggaccgaaggcgagcgtcagcgccatgcgctgcgtcgtgatgcgcgggcc
ggcctgttgattgatctcctggaactggaggcgctggaggggcgtctggatggcatcgaa
gacgagtgtcgggtactggagatccaatggaccgagcaacgaattcttgctgagcgcttg
ctgtcgctgcgtcagcaactggccagagcgcgggaagccgcggtggatcaagccttgtgc
gtcgagaccctggaagcggcattgagcgaaacccatagcgcattgatggaggcgcaagtt
cagggacgtctggtcagtttcgaagtttgcccacggctggtggccgaagtgatcggtgcc
tggacaggcataccgctggcgcaactggcacgggagcacaacgttaaagtcgccagcttc
gcggctgacctgcgtacacgcattcgcggtcaggaacaggctgtgcaggcgcttgaccgt
gcgatgcgcgccaccgctgctggcctgaacaaacctgacgccccggcgggtgtatttttg
ttggtggggcccagcggcgtcggtaagaccgagacggctctggccttggctgatctgcta
tacggtggcgaccgttttatcaccaccctcaatatggccgagtttcaggaaaaacatact
gtttcccgactgatcggcgcaccacctggctatgtcggttttggtgaaggcggcatgctt
accgaagccgtgcggcaaaaaccctattcagtcgtgttgcttgacgaggtcgaaaaggct
gacccggatgtgctgaacctgttctaccagatcttcgacaaaggtttggccaatgacggg
gaagggcgagagatcgactttcgtaatgtcctgattctgatgacgtcgaacctgggcagt
gagcgcatcagcgagctgtgcgagaacggcgcgcaaccgaatgccgaacgcctcgaagaa
gccattcgcccaatactcagcaaacatttcaaaccagcgctgctggcacgcatgtgcgtg
gtgccgtactacccggtaagcggctcggtgttgcgtgagctggtggaaatcaaactcgat
cgcttgggtgggcgactgcaccgtcgtcagctgaccttcagttattgcgggaggcttgtg
gaccacttggttgagcgttgcgctcgtagcgacggtggcgctcggctaatcgatcatctg
ctcgacctgcacctgaccccgcgggtggcggaccgcttgctcgcggccatggcggctggt
gaacagctgcgacatgtacacgccacgcttagcggcgacgccgtagcttgcgaattcaac
tga
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