Pseudomonas viciae: EPZ47_00580
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Entry
EPZ47_00580 CDS
T07167
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pvk
Pseudomonas viciae
Pathway
pvk02025
Biofilm formation - Pseudomonas aeruginosa
pvk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EPZ47_00580 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EPZ47_00580 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvk02044
]
EPZ47_00580 (tssM)
Secretion system [BR:
pvk02044
]
Type VI secretion system
Imp/Vas secretion system core components
EPZ47_00580 (tssM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
7tm_7
Motif
Other DBs
NCBI-ProteinID:
QBZ87271
UniProt:
A0A4P7PA22
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All DBs
Position
126848..130333
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AA seq
1161 aa
AA seq
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MKLLFRKAGAWMRQTWVWTLLLVFCAASLVWFVGPLLAVNDYKFWASPTARLLSISALLL
GWGLGMVCVNGRVANRETKETDTDRLRILRQTRIDNEQRELRSRFKKALKALRTSSLYPG
RGERWRNDLPWYLLMGPPASGKTSLLDCSGLEFPLNKLERRPMGEASGTRHCDWYFAEHA
VLVDTAGRYLTQVDVDVDSSAWATLLELLRKRRRSRPLSGMLVTVPTEVLLENSEDEVAT
LACKIRGRLQEVQRRLHVDVPIYLVLSKADSVSGFNEFFDSLTHEESDQVLGVSFGREQR
GMDVAVLRSEFEALLHRLDSQVIMRMHQERDILRRSRILDFPHQLRQIGTNLCLLVEQAF
TGSACPLRGFYLTCALQPAHCVAPTVARSNARPHASDGAAGRRSRFIHQLLSRVIFPEAD
LAGLNQRERLRILWGQRALFLGALTALGLFGLLWASGFSANHERLENLRTLTQRWDHQRL
ALMTGDDSIAMLESLDIRLKATQVFPPSREVPLYERVGLYQGDASNPPVTSAYERELQAQ
LLPRVAQMLEEHIRGNMNNREQLINSLRAYLMLDLQERRDVAWLKDRVAHDWSLRYAGNT
AVQKGLNAHFERLLEQPFTHGLNKPLVIQAREALRRESLATVVYRMLREQASHLPQYRFS
QHLGPQGSLLVGVDRVIPGFYTRQGYERYFSIQGSALVTELLRDNWVLGEGAGLSDMDMR
SLMIELEQLYFRDYADHWSEAVGQVALQSINRADEGAEQLAGLTSAHSPILQMLVQVREN
TRIQTVAERIGDVTQAVGRGSDTITQLAALAGKANGSLAENLPDTAQKSLQRRFEPLHRL
LDPDNGPTADLIQALQALDDVQLQLASLARASSPEQAAFELAKNRMGGQRDALGNLRNAS
ARLPRPVGVWFNGLAEDSWRLVLNDSYRYLNQRYQSELYSFYGKAISKRYPFSAHSASDV
AINDFREFFKDQGIVDRFFESYMRPFVSGHPGHYRLRSIDGQSLPMSRAYLDQMVTAHTI
RQSFFAETPSEPQVQFMLEPYTLDSTVSRSEFRFGDKSLEYRHGPILPMAFTWPNDAQDG
RTALVLDKMVGRGVGIEKNTGPWSLFRLFDLMQTEYLTGRDVRVLKADLGGLRANYLLTS
QRAPNPFDMSVLRTFRMPVQL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcttttcaggaaagccggcgcctggatgcgtcagacttgggtctggacgttg
ctgttggtattttgcgcggcgtcgctggtgtggttcgtcgggccactgctggcagtcaac
gactacaaattctgggcgagcccgacggcgcggctgctgagcatcagtgcgttgctcctg
ggctggggcctggggatggtttgcgtcaatgggcgcgtggcgaacagggaaaccaaggaa
acagacaccgaccggctgcgcattctgcgtcagacaagaattgataatgagcaacgcgag
ctgcgctcgcgtttcaagaaagccttgaaggcgctaaggacctcaagcctttatcccggt
cgtggcgaacgctggcgcaacgatttgccgtggtacttgctgatgggccctcccgccagc
ggcaagaccagcctactggactgctcgggcctcgaatttcccctcaacaagcttgagcga
aggccgatgggcgaggcgtcgggcactcggcattgcgactggtattttgccgaacatgcc
gtgctggtcgacactgccggacgctacttgacccaggtggatgttgatgtcgactcaagc
gcttgggccactttgctagaactgttgcgcaagcgtcgtcgcagtcgacccttgagcggc
atgttggtgactgtaccgaccgaggttctgctggaaaacagcgaggacgaggttgccacg
ctggcctgtaagattcgtgggcgcttgcaagaggtgcaacggcgattgcacgttgatgtg
cccatttacctcgtgctgagcaaagcggacagcgtgtccggcttcaatgaattcttcgat
tctctgacgcacgaggaaagcgaccaggtgttgggtgtgagtttcggtcgggagcagcgc
ggtatggatgtggccgtcttgcgttccgagttcgaggcgctactgcatcggctcgatagc
caggtgatcatgcgcatgcatcaggagcgcgacatcttgcgccgtagccgcattcttgat
tttccccatcaactaaggcaaatcggcacgaatctgtgcctgctggtcgaacaggcgttc
accggcagtgcctgcccgctacgtggcttttacttgacctgcgcattgcagccggcccat
tgcgtagccccgactgtcgcccgcagtaatgcgaggccccacgccagcgatggtgcggct
ggtcggcgctcgcggtttattcatcagttactcagtcgggtgattttcccggaggccgat
cttgctggccttaatcagcgcgagcgccttcgtattctttggggccagcgggctctgttc
ctcggggcgctaacggccctcggcctgttcgggttgttgtgggcgagcggtttctcagcc
aaccatgagcgtttggaaaacttgcgtacattgacgcaacgctgggatcaccagcgcttg
gccctgatgacaggtgatgattcgattgcgatgctcgaatcacttgatatccgactcaaa
gccactcaggttttcccacccagtagggaagtgccgctgtatgagcgagttggtctttac
cagggggacgcgagtaacccgccagtgaccagcgcttacgagcgtgaactacaggcgcaa
ctgttgcctcgggtcgcgcagatgctcgaggagcatatccgcggcaatatgaataatcgc
gaacagctgatcaatagcctgcgcgcgtacttgatgctcgacctgcaggagcgtcgcgat
gtcgcgtggctcaaggatcgggtcgcccacgactggtccctgcgttacgctggcaacaca
gcggtgcagaagggtttgaatgcccacttcgagcgtttgctggagcagccatttacccat
gggctcaacaagccgttggtgatccaagcccgggaagccctgcgcagagagtcccttgcc
accgtcgtttatcgaatgttgcgcgaacaggccagtcacctgccgcaataccggttcagc
cagcatctgggaccacagggttcgttgctggttggcgtcgatcgtgtgattcccggtttc
tacactcggcagggttacgaacgatacttttcgattcagggttcggcactggtcactgaa
ttgctgcgggacaactgggtactgggagaaggtgcgggtcttagcgacatggacatgcgc
agcctgatgattgaactggagcagctatattttcgtgactacgctgatcattggagcgaa
gcggttggccaggttgccttgcaatcgatcaatcgcgcagatgagggcgccgagcaactg
gcggggctgacctcggcccattcgccgattctgcagatgctggtgcaagtgcgcgaaaac
actcggatccagacggttgccgagcgtattggcgacgtgacgcaagcggtcggaaggggg
agcgacactattactcaactcgctgccctcgcagggaaggccaatggttccctggccgaa
aacctgccggacactgcacaaaaatccttgcagcggcgttttgaaccgctgcaccgtttg
ctggacccggacaatggcccgacggcggacctgattcaggccttgcaggccctcgatgac
gtgcaactgcaactggcgagcctggcccgtgccagttcgccagagcaggccgcgttcgag
ctggccaaaaaccgcatgggtggccagcgcgatgcactgggtaacctgcgcaacgcgtcc
gctcgtttgccgcgtccggttggtgtgtggttcaacggattggccgaagacagctggcgc
ctggtactcaatgattcataccgttacctgaaccagcgctaccagagcgagctgtacagc
ttttatggcaaggcgatcagcaagcgctatccgttcagtgcccacagcgccagtgacgta
gcgatcaatgatttcagggagttcttcaaggaccaaggtatcgtcgatcgattctttgaa
agttacatgcggcctttcgtcagtggccatccggggcactatcgcctgcgcagcatcgac
ggccaaagcctaccgatgtccagggcctatcttgatcaaatggtgacggcgcacaccatc
cgccagagctttttcgccgaaaccccgtccgagccgcaggtgcagttcatgcttgagccg
tacacgctcgattctactgtgagccgttccgaattccgatttggcgacaagtcgcttgag
taccgtcacggtccgatcctgcccatggcattcacctggccaaacgacgcgcaggacggg
cgaaccgccctggtgctggacaaaatggtcgggcgaggagtcggcatcgagaagaacacc
gggccatggtcactgtttcgtttgttcgacctgatgcagaccgagtacctgaccggtcgc
gacgtgcgcgtgctcaaggcggacttggggggcttgcgagccaattatctgttgacgagt
cagcgcgcgccgaaccctttcgacatgagcgtgctacgtaccttccgaatgccggtgcag
ctttga
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