Pseudomonas viciae: EPZ47_00705
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Entry
EPZ47_00705 CDS
T07167
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
pvk
Pseudomonas viciae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_2
TPR_1
TPR_7
TPR_16
TPR_15
TPR_11
TPR_12
TPR_10
TPR_8
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
QBZ87288
UniProt:
A0A4P7PA54
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Position
153744..156224
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AA seq
826 aa
AA seq
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MPRTVGPFVQRGLRPLFRVALCSQLCWPMLAFADTAYDQMVIDARAGHYTPALTALRQVP
AGQASAAQISDHLQIASWAGLDAEVVQVYETQGRYRDLPVQALSATARAYRNLKRWDAAT
ELYRQALAIDPRNPDLQLGLILTQADAGKPDEAVSRAKALVAAKPDDPMRRLALGYALTC
ANSPHEALFEYDQAFTRAGNKPEVAREYVIALQRAQLPEPALRLARLQPGLIDPGMRRRL
EGDVAAERVRLTDMASRSETERFIIADRALADYDKLLATWSPVTEAHDDVLRWRIDRLGA
LNARARRAEVIAEYQKLIAEGVSIPTYALRWVASSYLEQREPEIAVDLYRRVLTAPDADP
ADRFEDSTALYYALLESEKSEEARVLAEDLAKAQPPRVELKGLPIGNPNDEWMDAQQLAA
QAGTYGADLPSAEARLDTLVNQGPGNIGLRLAQADLYQARDWPRRSESLLKEVEATTPRD
RGLEVAQARAAMDLQEWRQMDALVDDVVARYPENAHVKRLQRQREVHDMAELRIEAYTGK
SYGGGSGDAGAVTGSRDFGIETLLYSPPINEDWRLFGGAGYATGDFEEGTGHHRWQRLGV
ERRTRDMTLEAEVSNHSYGSGDKQGARLAVARDINDHWQYGGSLDYLSAETPLRALNSGI
RANGGSGFVRWRANESREWRLAVSPSHFSDGNNRLEAVVTGREGIYSAPRLQVELGLEVA
TSRNSGSNEVPYFNPKSDFTVMPTVNANHVLYRRYETTWSQQFQVGAGTYSQRDHSTGAM
GLLGYGQRFIWNDVLEAGAALSWLNRPYDGDRESDLRLLVDLTYRF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtactgtgggtccttttgttcaacgtggtttgcgcccgttgtttcgcgtcgcg
ctgtgcagccaattgtgttggccgatgctggcgtttgccgatactgcctatgaccaaatg
gtgatcgacgcccgtgcaggccattacacgcctgcgctgaccgcgttgcgccaggtgccg
gccggccaggccagtgccgcgcagatcagcgaccatctgcagatcgccagttgggcgggg
ctcgatgccgaagtcgtgcaagtctatgagacccaggggcgctatcgcgacttgccggtt
caggcgctgagcgcaacggctcgcgcctatcgcaacctcaagcgttgggatgcggctacc
gagctgtatcgccaggcgctggcaatcgaccctcgcaatcccgacctgcaacttggcttg
atcttgacccaggcggatgccggcaagcccgatgaagccgtcagccgcgccaaggccttg
gtcgccgccaagcctgacgatccaatgcgccgactcgccttgggctacgccctgacctgt
gcgaacagcccccacgaggcgctgttcgagtacgaccaggctttcacccgcgccggcaac
aaacccgaggtcgcgcgggaatatgtcatcgccctgcaacgtgcccaattgccggagccg
gccctgcgcctggcgcgtctacagccggggctgattgaccctggaatgcgtcggcggctg
gaaggcgacgtggcggccgaacgggtacgcctgacggatatggcgagccgcagcgaaacg
gagcgcttcatcattgcagaccgcgccttggccgattacgacaagctactcgccacctgg
agcccagtgactgaggcccatgatgacgtgctccgttggcgcatcgatcgcctgggtgcc
ctcaacgctcgcgcccgccgtgctgaagtgattgccgagtaccagaagctgatcgccgag
ggcgtaagcattccaacttatgccctgcgctgggtggcctcttcctacttggaacagcgg
gaaccggagatcgctgtcgatctgtaccgccgggtattgacggcgcccgatgccgatcct
gcggaccgcttcgaagacagcacggcgctctactacgcgctgctggaaagtgaaaaatcc
gaagaggcccgtgtgctggccgaagacctggcaaaagcccagccaccacgcgtcgagctc
aagggcctgccgatcggcaaccccaacgacgagtggatggacgcccaacaactcgccgcc
caggccggtacatacggcgccgacctgccttccgccgaagcgcgcctggacaccctggtc
aatcaaggccctggcaacatcggcctgcgcctggcccaggccgatctgtaccaggcccgt
gactggccgcgtcgttcggaaagcctgctcaaggaagtcgaagccacgacgccgcgcgac
cgtggcctggaagtcgcccaagcccgtgccgccatggatttgcaggagtggcggcagatg
gatgctctggtcgatgacgtggtcgcccgctacccggaaaacgcccatgtcaaacgcctg
caacgccagcgcgaagtgcatgacatggccgaactgcgcatcgaagcctataccggcaag
agctacggcggcggcagcggtgacgctggcgcggtcactggcagtcgggattttggcatc
gaaacgctgctctacagcccacccattaacgaagactggcgactgttcggcggcgctggc
tacgccactggcgatttcgaggaaggcaccggtcatcaccgttggcagcgccttggtgtc
gagcgccgcacccgtgacatgactctggaagccgaggtctccaaccactcgtatggttcc
ggtgacaaacagggcgcgcgcctggccgtggcccgagacattaatgaccactggcaatac
ggcggtagcctggattacctctcggccgaaaccccgttgcgggcgctcaacagcggcatc
cgtgccaatggcggcagcggttttgttcgctggcgtgccaatgaaagtcgcgagtggcga
ctggctgtcagcccgtcccatttcagcgatggcaacaatcgtctcgaggccgtggttacc
ggtcgcgagggcatctacagcgctccgcgcctgcaagtggagttgggcctggaagtggcg
accagccgtaacagcggttccaacgaagtgccttacttcaatcccaagtcggacttcacc
gtcatgccgaccgtgaacgccaaccacgtgttgtaccgccgctacgaaaccacctggagc
cagcagttccaagtgggggccggtacctacagccagcgcgaccacagtaccggcgccatg
ggtttgctcggctacggccagcgtttcatctggaacgacgtgctggaggcaggcgccgca
ctgagctggctcaaccgcccttacgacggcgaccgcgaaagcgacctgcgcctgcttgtc
gacctcacttaccgcttctag
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