Pseudomonas viciae: EPZ47_00905
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Entry
EPZ47_00905 CDS
T07167
Name
(GenBank) retention module-containing protein
Organism
pvk
Pseudomonas viciae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LapA
HemolysinCabind
VWA
VWA_2
Cadherin_3
Calx-beta
CFSR
Motif
Other DBs
NCBI-ProteinID:
QBZ87324
UniProt:
A0A4V1CA15
LinkDB
All DBs
Position
complement(199297..208338)
Genome browser
AA seq
3013 aa
AA seq
DB search
MSSVVAVVKSIVGQVFAVSPEGIRRVLIEGDRLYTGDQLDTGPAGAVTLELADGRSLDLG
RDTQWSASAPDSSTDLAQATAQAAPSVEELQQAIAAGVDPTTALEATAAGATAAGTGGAA
GGGHSFVVLDATAGSVDPTVGFPTEGLSTTAAADDDITGGDTNADTTANALLNSTLTLSA
TPTLTEAGGVLVYTATVTQAPQTDLTVTLSNGSVIVIPAGQTTGSVNVPLAPNDTVYNDP
SQISVTVTGTTGGSGIAVTLPTTPAVTQITDTIDTTNVTLSADNTVTEGGQITYTATLTN
PAQTPVTVTLSNGSVITIAAGQTTGTVAVDTPANDVYNNGSTVSTTITGATGGNFENLVP
STTPAVTTITDSVDATGLTLTASETITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAA
GQTTGTVAVDTPANDVYNNGSTVSTTITGATGGNFENLVPSTTPAVTTITDSVDATGLTL
TASDTITEGGQITYTATLTNPAQTPVTVTLSNGSVITIAAGQTTGTVAVDTPANDVYNNG
STVSTTITGATGGNFENLVPSTTPAVTTITDSVDATGLTLTASETITEGGQITYTATLTN
PAQTPVTVTLSNGSVITIAAGQTTGTVAVDTPANDVYNNGSTVSTTITGATGGNFENLVP
STTPAVTTITDSVDATGLSLSASTEVAEGGQITYTATLTNAAGSPVTVTLSNGAVINIAA
GATTGSVSVDAPTDDVYKDAGKVEVSIDNATGGNFENLVPNTTPAVTDVTDTIDTSTVSL
TATSTVAEGGTIVYTASVNAPVTGAPLVVTLSNGQSITIPVGSSSGTVNFTTPNDALAGG
DNLSVKIDDAQGGNYENLVADQTPAETSVTDVQDSTGLTLSATDTVAEGGQITYTATLTN
AAGTPVTVTLSNGAVINIAAGATTGSVSVDAPADDVYKDAGKVEVSIDNATGGNFENLVP
NTTPAVTDVTDTIDTSTVSLTATSTVAEGGTIVYTASVNAPVTGAPLVVTLSNGQSITIP
VGSSSGSVNFATPNDALAGGDNLSVKIDDAQGGNYEKLEIDGTPADTSVTDVQDTTGLTL
SATDTVAEGGQITYTATLTNAAGTPVTVTLSNGAVINIAAGATTGSVSVDAPTDDVYKDA
GKVEVSIDNATGGNFENLVPSTTPAVTDVTDTIDTSTVSLTATSTVAEGGTIVYTASVNA
PVTGAPLVVTLSNGQSITIPVGSSSGSVNFATPNDALAGGDNLSVKIDDAQGGNYEKLEI
DGTPADTSVTDVQDTTGLTLSATDTVAEGGQITYTATLTNAAGSPVTVTLSNGAVINIAA
GATTGSVSVDAPTDDVYKDAGKVEVSIDNATGGNFENLVPSTTPAVTDVTDTIDTSTVSL
TATSTVAEGGTIVYTASVNAPVTGAPLVVTLSNGQSITIPVGSSSGSVNFATPNDALAGG
DNLSVKIDDAQGGNYEKLEIDGTPADTSVTDVQDTTGLTLSATDTVAEGGQITYTATLTN
AAGSPVTVTLSNGAVINIAAGATTGSVSVDAPTDDVYKDAGKVEVSIDNATGGNFENLVP
STTPAVTDVTDTIDTSTVSLTATSTVAEGGTVVYTASVNAPVTGAPLVVTLSNGQSITIP
VGSSSGTVNFTTPNDALAGGDSLSVKIDDAQGGNYENLVADQTPAETSVTDVQDSTGLTL
SATDTVAEGGQITYTATLTNAAGTPVTVTLSNGAVINIAAGATTGSVSVDAPTDDVYKDA
GKVEVSIDNATGGNFENLVPSTTPAVTDVTDTVNTTTVSISGSTSVTEGQAATYTVSLTN
PAQTEVTVKIVYSGTAADGTDFTGVYTVKVPANATSATFDVATLDDKITEGTENFVVKID
SATGGNFEQLAVSGTNGSVSTSIIDNDAPPVLDLDANNSSGKSGADYQVTFTEGTTGPGV
SIGDTDLKITDPDSTMLTGATIVLTNRQPGDALNLGNSVNGISINANSTDGKVTLTLSGN
ATLADYMQQIKNISFINNSEDPSTVPRIITVTVTDGSNYSNTATTTVNVVGVNDAPVATG
GAVTGTEDTSLVLGWSTFGVSDVDNAAASLGVKITELPADGKLQYLDGATWKDVANNQTF
TKADIDAGKLRFTPDANESGANGYVGSSTGNNQADYAQVKFQQTDGQALGNTGTVKIDIT
PVADAPTLNVAGNAVTSTGLIKEVWTGLSGLGTDGSGAPSGTLKSVIDAAGTPNSSGTVT
NVQSDSNVNPGTASKTSGLIFLEAGKTYTFSGTGDDSLLVTIGGKDVAAITWGAGGKLNG
SFTPTSSGYYTLDIYHHNQTGPGSYDVNLSVNGSTPVDLNGAGVPLYTSVTDLTNAGVTV
SDLHGTNGEGYYDGFKLNEGAEGTSVHLSKITTALTDTDGSESLSVKIGGMPEGSVLSDG
AGHFATVGSNGEASVSGWNLGSLTLTPPTYYNGQLNLTVTSTSTEALGGSATTTAQIPVT
VYPATYNAITATSGSDNVTGTDGNDVVVADIGGLTVVPGTNYNIAFMVDSSGSMSEASLT
AAKNSLTSVFNTLKQSMGGNSGTVNIFLADFDSQVNTSVSVNLNDPDALNQLKGVLDSMA
SGGGTNYEDVFKTTANFFKSTEAMGNTGAKNLTYFITDGKPTYYQTGEQTNPTLYDNVKL
DDVLSASKYTVGKYYTQTIDSTHKYTIYENGEMYLSTKNGKKWTDSYVGKVHAEGNGTFE
LSNLGGTGYGDYWNYVDSATGSSESFTLLKGLSTVEAIGLNNDVTLNDLKPYDSDSTPQT
NIDPNNLANSIIGHTEATLPGSDTVNGGEGNDILFGDLVSFNGIAGEGYQAIQAFVAQQS
GVDVSKVTTSNVHQYITEHYTAFDVSGAHDGNDTLLGGAGNDILFGQGGNDTLNGGKGND
ILLGGSGNDTLLGGPGNDTLIGGLGGDTFVWKSGDTGTDVIKDFKASDGDRIDLRDLLQG
ETGSTIDHFLKISTVDGVSSLQVSTTGQFNAANGAAATPDVTIKLEGNNWSNVNLNSLIA
GSDPTIKVDHNNS
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgttgttgccgttgtcaaaagcattgtcggtcaggttttcgccgtatccccc
gagggcattcggcgcgtactcattgaaggggatcgcctgtacacgggcgaccagctggac
accggccctgccggcgccgtcacactggagctggccgatggccgctccctggacctgggc
cgcgacactcagtggagcgccagtgctccagattcttccactgacctggcacaagccacc
gctcaggccgcgccgtcggtagaagagctacaacaagccatcgccgcaggcgtcgacccg
acgaccgccctggaagccaccgccgccggcgctaccgccgcaggtacgggtggtgccgcc
ggtggcggccacagctttgtggtgctggatgccaccgctggcagcgtcgatcccaccgtg
ggtttcccgactgaaggtttgagcacgaccgcagccgctgacgacgacatcacaggcggc
gacaccaatgctgacaccacagccaacgcgctgctcaattcgactttgaccctgagcgcc
accccgactctgaccgaggccggcggcgtgctggtctacaccgcgaccgttacccaggcg
ccccagaccgacctgaccgtgaccctgtccaacggctccgtgatcgtgattcctgccgga
caaaccaccggcagcgtcaacgtaccgctggcaccgaacgacaccgtctacaacgaccca
agccagatcagcgtgaccgtcaccggtaccaccggcggcagcggcattgccgtgaccctg
cctaccacgccggccgtaacccagatcaccgacaccatcgacaccaccaacgtcaccctg
tcggcagacaatacggtgactgaaggtggccagatcacctacaccgctaccctgaccaac
ccggctcaaactccagtgaccgtgaccttgagcaatggctcggtcattaccatcgctgcg
ggccagaccaccggtaccgtcgctgtcgataccccggccaatgacgtctacaacaatggc
agcaccgttagcaccaccattactggcgcaacgggtggcaattttgaaaacctggtgccg
agcaccacgcctgcggtcaccacgattaccgattcggtcgatgctaccggcctgactttg
accgccagcgagaccatcactgaaggcggccagatcacttacaccgcgaccctgaccaac
ccggctcaaactccagtgaccgtgaccttgagcaatggctcggtcattaccatcgctgcg
ggccagaccaccggtaccgtcgctgtcgataccccggccaatgacgtctacaacaatggc
agcaccgttagcaccactattaccggtgcgaccggcggcaactttgaaaacctggtgccg
agcaccacgcctgcggtcaccacgatcaccgattcggtcgacgcgaccggcctgactttg
accgccagcgataccatcactgaaggcggccagatcacttacaccgctaccctgaccaac
ccggctcaaactccagtgaccgtgaccttgagcaacggctcggtcatcaccatcgctgcg
ggccagaccaccggtaccgtcgccgtcgataccccggccaatgacgtctacaacaatggc
agcaccgttagcaccactattaccggtgcgaccggcggcaattttgaaaacctggtgcca
agcaccacgcctgcagttaccacaatcactgattcggtcgatgctaccggcctgactttg
accgccagcgagaccatcactgaaggcggccagatcacttacaccgctaccctgaccaac
ccggctcaaactccagtgaccgtgaccttgagcaacggctcggtcatcaccatcgctgcg
ggccagaccaccggtaccgtcgctgtcgataccccggccaatgacgtctacaacaatggc
agcaccgttagcaccaccattactggcgcaacgggtggcaattttgaaaacctggtgccg
agcactacgcctgcggtcaccacaatcaccgattcggtcgacgcgaccggcctgagcttg
tcggcgtccaccgaagtggctgaaggcggtcagatcacctacaccgcaaccctgaccaat
gccgctggttcgccagtgaccgtaaccttgagcaatggcgcggtgatcaacatcgccgcc
ggtgccaccacaggcagcgtcagcgttgatgcaccgactgacgacgtctacaaagatgcc
ggcaaagttgaagtcagcattgataacgccactggcggcaacttcgaaaacctggtgcca
aacaccacgccagcggtcaccgacgtcactgataccatcgacaccagcaccgtttcgctg
accgcgacctcgactgtggctgaaggtggcaccatcgtttacaccgcttcggtgaacgca
ccggttaccggcgctccgttggtcgtcactctgtcgaacggccagagcatcacgattcca
gtcggctccagctcaggtaccgtgaatttcaccacaccaaacgacgccctcgctggcggc
gataacttgagcgttaagatcgatgacgctcagggcggtaattacgagaacctggttgca
gatcaaacaccggctgaaacctcggtcactgatgtccaggactccacgggcctgactctg
tcggcaaccgatactgtcgccgaaggtggtcagatcacctacaccgcaaccctgaccaat
gccgccggcactccagtcaccgtaaccctgagcaacggtgccgtgatcaacatcgctgcc
ggcgccaccacgggcagcgtcagcgtcgacgcaccggctgatgacgtctacaaagatgcc
ggcaaggttgaagtcagcattgataacgccactggcggcaacttcgaaaacctggtgcca
aacaccacgccagcggtcaccgacgtcactgataccatcgacaccagcaccgtttcgctg
accgcgacctcgactgtggctgaaggtggcaccatcgtttacaccgcttcggtgaacgca
ccagttaccggcgctccactggtcgtcactctgtcgaacggccagagcattaccattccg
gtcggttcgagcagcggctcggtcaacttcgctacaccaaacgacgcccttgctggcggc
gataacttgagcgtgaaaatcgatgacgctcagggcggcaactacgaaaaactggaaatc
gacggcacgcctgccgacacttcagtgaccgatgtccaggacaccacgggcctgactctg
tcggcgaccgacaccgtcgccgaaggcggtcagatcacctacaccgcaaccttgaccaac
gccgccggaaccccggtcactgtgaccctgagcaatggcgccgtgatcaacatcgccgcc
ggtgccaccacaggcagcgtcagcgttgatgcaccgactgacgacgtttacaaagacgct
ggcaaggttgaagtcagcattgataacgccactggcggtaacttcgagaacctcgtacct
agcaccacgccagcggttactgatgtcactgacaccatcgacaccagcaccgtttcgctg
accgcgacctcgactgtggctgaaggcggcaccatcgtttacaccgcctcggtcaatgct
ccggtcaccggtgctccgctggtcgtcactctgtcgaacggccagagcattaccattccg
gtcggttcgagcagcggctcggtcaacttcgctacaccaaacgacgcccttgctggcggc
gataacttgagcgtgaaaatcgatgacgctcagggcggcaactatgaaaaactggaaatc
gacggcacgcctgccgacacttcagtgaccgatgtccaggacaccacgggcctgactcta
tcggcgaccgacaccgtcgccgaaggcggtcagatcacctacaccgcaaccctgaccaat
gccgctggttcgccagtgaccgtaaccttgagcaatggcgcggtgatcaacatcgccgcc
ggtgccaccacaggcagcgtcagcgttgatgcaccgactgacgacgtctacaaagatgcc
ggcaaagttgaagtcagcattgataacgccactggcggtaacttcgagaacctcgtacct
agcaccacgccagcggttactgatgtcactgacaccatcgacaccagcaccgtttcgctg
accgcgacctcgactgtggctgaaggcggcaccatcgtttacaccgcctcggtcaatgct
ccggtcaccggtgctccgctggtcgtcactctgtcgaacggccagagcattaccattccg
gtcggttcgagcagcggctcggtcaacttcgctacaccaaacgacgcccttgctggcggc
gataacttgagcgtgaaaatcgatgacgctcagggcggcaactatgaaaaactggaaatc
gacggcacgcctgccgacacttcagtgaccgatgtccaggacaccacgggcctgactcta
tcggcgaccgacaccgtcgccgaaggcggtcagatcacctataccgcaaccctgaccaat
gccgctggttcgccagtgaccgtaaccctgagcaatggcgccgtgatcaacatcgctgcc
ggcgccaccacgggcagcgtcagcgttgatgcaccgactgatgacgtctacaaagatgcc
ggcaaagttgaagtcagcattgataacgccaccggcggcaacttcgagaacctggtgcca
agcaccacgccagccgtcactgacgttactgacaccatcgatacgtcaaccgtcagcctg
actgctacttctaccgtggccgaaggcggcaccgttgtttacaccgcctcggtcaatgct
ccggtcaccggtgctccactggttgtgaccttgagcaacggccagagcatcacgattccg
gtcggctccagttcgggcactgtgaatttcaccacgccaaacgatgcgttggcgggtggt
gattcactgagcgtgaagattgacgacgctcagggcggtaattacgagaacctggttgca
gatcaaacaccggctgaaacctcggtcactgatgtccaagactccacgggcctgactctg
tcggcaaccgatactgtcgccgaaggtggtcagatcacctacaccgcaaccctgaccaat
gccgccggcactccagtcaccgtaaccctgagcaacggtgccgtgatcaacatcgctgcc
ggcgccaccacgggtagcgtcagcgttgatgcaccgactgacgacgtctacaaagacgcc
ggcaaagtcgaagtcagcattgataacgccaccggtggcaacttcgaaaacctggtgcca
agcaccacgccagcggtcaccgatgtcaccgacaccgtcaacaccaccaccgtcagcatc
tccggcagcacctcggtcaccgaaggccaagccgccacgtacacagtcagcctgacgaat
ccggcgcaaaccgaggtgacggtcaaaatcgtctacagcggtaccgccgccgacggcacg
gatttcaccggggtgtacaccgtgaaggtcccggccaacgccaccagtgccacctttgac
gtggcaacactggatgacaagatcaccgaaggcacggaaaacttcgtggtcaagattgac
tcggccaccggtggcaacttcgagcagttggctgtcagcggcaccaacggcagcgtcagc
acctcgatcatcgacaacgatgcgccgccagtgctcgacctggacgccaacaactccagc
ggcaagtccggcgccgattatcaggtgaccttcaccgaaggcaccactggcccgggcgtg
tccatcggcgacaccgacctgaaaatcaccgacccggacagcaccatgctgaccggcgcc
accatcgtgctgaccaaccgtcagcccggcgatgcgctgaacctgggcaacagcgtcaac
ggcatcagcatcaacgccaacagcaccgatggcaaagtcacgctgacgctgtcgggcaac
gcgacgctggccgactacatgcagcagatcaagaacatcagcttcattaacaacagcgaa
gatccgagcaccgtgccgcgcatcatcaccgtgacggtgaccgatggcagcaactactcc
aacaccgccaccaccacggtgaacgtggtcggggtcaatgatgcgccggttgccactggc
ggcgccgtgaccggtaccgaagacacttctctggtcctcggctggtcgaccttcggcgtc
agcgacgtggacaatgccgccgccagcctgggtgtgaaaatcaccgagctgccggccgat
ggcaaattgcagtacctggacggtgcaacctggaaggacgtggccaacaaccagaccttc
accaaggctgacatcgacgccggcaagctgcgcttcactccggacgccaacgagtccggc
gccaatggttatgttggcagcagcacgggcaacaaccaggccgactacgcacaggtcaaa
ttccagcaaaccgatggccaggcactgggcaataccggcactgtgaaaatcgacatcacc
ccagtcgccgacgcaccgaccctcaacgtggccggcaacgccgtgacctccaccggtttg
atcaaggaggtctggaccggcctgtcgggcctgggcaccgatggcagcggtgcgccatcc
ggcacccttaaatcggtgatcgatgccgccggcacgccgaacagcagcggcaccgtgacc
aacgtgcagtccgacagcaacgtcaacccgggcacagcgtcgaaaacctcgggcctgatc
ttcctcgaagccggcaagacctacaccttcagcggtaccggcgacgacagcctgctggtg
accatcggcggcaaggacgtggcggccatcacctggggcgcgggcggcaagttgaacggc
tcgttcaccccgacctccagcggctactacaccctggacatctaccaccacaaccagacc
ggtccgggcagctatgacgtgaacctgtcggtcaacggcagcacaccggtcgacctgaac
ggcgccggcgtgccgttgtacaccagcgtgaccgacctgacgaacgctggcgtgacggtc
tccgatttgcacggtaccaacggcgaaggttattacgacggcttcaagctcaacgaaggc
gccgaaggcaccagcgtgcacctgtcgaaaatcaccaccgccctgactgacaccgacggc
tccgaaagcctgagcgtgaagattggcggcatgccggaaggcagtgtgctgagcgacggc
gcgggccacttcgcgaccgtgggcagcaacggcgaagcgtcggtcagtggctggaacctg
ggcagcctgaccctgaccccgccgacctattacaacggccagctcaacctgaccgtgact
tccacctccaccgaagccctcggcggatcggcgaccaccacggcgcagatcccagtcacc
gtgtacccggcgacctacaacgccatcaccgccacctccggcagtgacaacgtgaccggc
accgacggtaacgacgtggtggtcgctgacatcggcgggctgacagtggtgccgggcacc
aactacaacatcgccttcatggtcgatagctccggcagtatgagcgaggcgtccctcacg
gcggccaaaaactcgctgacctcggtgttcaacaccctcaagcagagcatgggcggcaac
tccgggaccgtgaacatcttcctggcggacttcgacagccaggtgaacacgtctgtctcg
gtcaaccttaacgacccggacgcgttgaaccaactcaaaggcgtgctcgactcgatggcc
tccggtggcggcaccaactacgaagacgtgttcaagaccacggcgaacttcttcaaaagt
accgaagccatgggcaataccggcgcgaagaacctgacgtatttcattaccgacggtaag
ccgacctactaccagaccggtgagcagaccaacccgaccttgtatgacaacgtcaaactc
gatgacgtactgagcgcctccaagtacaccgtcggcaagtactacacccagacgatcgac
agcacgcacaagtacaccatctacgaaaacggtgagatgtacctgtcgaccaaaaacggc
aagaaatggaccgatagctatgtgggcaaggtacatgccgagggcaatggcacctttgaa
ctgtcgaacctgggtggcaccggttatggcgattactggaactatgtcgattcggcaaca
ggctcgagcgaaagcttcacactgttgaagggcctgagtacggtcgaagccatcggcctg
aacaacgacgtgaccctgaacgacctcaagccctacgattcggactcgacaccgcagacc
aacatcgacccgaacaacctggccaactcgatcatcggccacaccgaagcgaccctgccg
ggctccgacacggtcaacggcggcgaaggcaacgacatcctgttcggcgacctggtgagc
ttcaacggcatcgccggcgagggctatcaggctatccaggcgttcgtcgcccagcagagc
ggtgtggacgtcagcaaagtcaccaccagcaacgtgcaccagtacatcaccgagcactac
accgcgttcgatgtgtccggtgcccacgatggcaacgacaccctgctcggtggcgccggc
aatgacattctcttcggccagggcggcaacgacacgctcaatggcggcaagggcaatgac
atcctgctgggtggctctggcaacgacaccctgctcggtggcccgggcaatgacaccctg
atcggcggcctgggaggcgatacctttgtctggaagtccggcgacaccggcaccgacgtg
atcaaggacttcaaggccagcgacggcgaccggatcgacctgcgggatctgttgcagggc
gaaaccggcagcaccattgaccacttcctgaaaatcagcacggtcgatggcgtgtcgtcg
ctgcaggtcagcacgaccggccagttcaacgcggccaacggcgcagcggccacaccggac
gtaacgatcaagctcgaaggcaacaactggtcgaacgtcaacctgaactcgctgatcgcc
ggcagtgacccgaccatcaaggtcgatcacaacaacagctga
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integrated database retrieval system
