Pseudomonas viciae: EPZ47_01420
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Entry
EPZ47_01420 CDS
T07167
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk00521
Streptomycin biosynthesis
pvk00523
Polyketide sugar unit biosynthesis
pvk00525
Acarbose and validamycin biosynthesis
pvk00541
Biosynthesis of various nucleotide sugars
pvk01055
Biosynthesis of vancomycin group antibiotics
pvk01100
Metabolic pathways
pvk01110
Biosynthesis of secondary metabolites
pvk01250
Biosynthesis of nucleotide sugars
Module
pvk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EPZ47_01420 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EPZ47_01420 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EPZ47_01420 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EPZ47_01420 (rfbB)
00525 Acarbose and validamycin biosynthesis
EPZ47_01420 (rfbB)
Enzymes [BR:
pvk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EPZ47_01420 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QBZ87422
UniProt:
A0A4P7PBP0
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All DBs
Position
complement(321052..322134)
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AA seq
360 aa
AA seq
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MRILISGGAGFIGSALIRHLILDTEHQVLNLDKLTYAGNLESLSSIDHDSRYEFVQADIV
DQPTVSAVLARFKPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYSLLEATRAYWQTLPE
AQKRAFRFHHVSTDEVYGDLHGVDDLFTETTAYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGQQVRDWLYVEDHARALLKVVT
EGVVGETYNIGGHNEQKNIEVVRSICALLEELAPHKPEGVAGYADLITFVKDRPGHDLRY
AIDAGKIERELGWTPQETFETGLRKTVLWYLENLLWCRRVQDGSYQGERLGSLDNQDVIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcttatcagtggtggtgctggcttcattggctcagctctcatacgccacttg
atcctggacaccgagcaccaggtcctgaacctcgacaagctgacatacgccggcaatctc
gaatcgctgagcagcatcgatcacgacagccgctacgagttcgtgcaggccgatatcgtc
gatcaaccgaccgtcagcgcggtgctcgcacgattcaagcccgacgccatcatgcacttg
gcggcagagtcccacgtagaccgttccattgacggaccggcagactttatccagaccaac
atcgtcggcacctacagcctgctggaggccacccgcgcctattggcagaccctgcccgag
gcgcagaaacgcgcgtttcgcttccaccacgtttccaccgacgaagtgtatggcgacctg
cacggggtggacgacctgttcaccgaaaccaccgcttatgcgccaagctctccctattcg
gccagcaaagcggcgtccgaccacctggtccgcgcctggcagcgaacctacggcttgccc
gtgctgttgaccaattgctcgaacaactacgggccgttccactttcccgagaaactgatt
cccctggtgatcctcaacgcactggctggtaaaccgctgccggtgtatggcgatggccag
caagtgcgcgactggctgtacgtcgaagaccatgcccgggcgctgctcaaggtcgtcacc
gaaggcgtggtcggcgagacctacaacatcggcggccacaatgagcaaaaaaacatcgag
gtggtgcgcagcatctgcgcgttgctcgaagaactcgccccccacaaacccgaaggggtc
gcgggctatgcggacctgatcaccttcgtcaaggatcgccccggccacgacctgcgctat
gccatcgacgccggcaagattgaacgcgaactcggctggacgccgcaggaaaccttcgag
accggcctgcgcaaaaccgtgctgtggtacctcgaaaacctgctgtggtgccgacgtgtc
caggacggcagctatcaaggcgagcgcctgggctcgctcgacaaccaggacgtgattgca
tga
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