Pseudomonas viciae: EPZ47_03485
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Entry
EPZ47_03485 CDS
T07167
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EPZ47_03485 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_03485 (recC)
Enzymes [BR:
pvk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EPZ47_03485 (recC)
DNA repair and recombination proteins [BR:
pvk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EPZ47_03485 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBZ87806
UniProt:
A0A4P7PBQ0
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All DBs
Position
783024..786476
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AA seq
1150 aa
AA seq
DB search
MPDATSLSPAFMVVHGNRLDELRSLVISLMRRYPLGPLENEIALVQSNGIAQWLKLALAE
DPEDDDTGGCGIAAAIDVQLPGSFMWQLYRMVLGRDEIPIKSLLDKAPLTWRLMRLLPQL
IEQPHFEPLRRFLTHDTDLRKRYQLSERLADLFDQYQVYRADWLEDWAEGRHQTRNVRGE
IKPLAPANCWQAELWRALLLDVGEKGMAQSRAGVHQRYIERINSLEVAPKGLPARVIVFG
ISSLPAQALEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKTGMPVVL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRSVFRDGRIDLFSDGNPTTLLSQL
QDDILELRPLNETREHWPTVDTARDGSVRFHIAHSAQREVEILHDQLLAHFSADPTLRPR
DIIVMVPDIDSYAPHIRAVFGQLDRTDPRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRERFGIDEADLPTLHRWIEGAGIRWGMSAEHRAGLGLPAELEQNS
WHFGLHRMLLGYAVGSSLAYEGIEPYDEIGGLDAALIGPLVALLDALEVAHKELTQPASP
QEWGSRLHDLVQVFFQASNEHDDYLLAQLEDLRETWLETCESVGLHDELPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSAREKLYISWVGRSIRDNSERPASVLIGQLRDHLASGWRLAD
DSKNLLEALTQEHPLQPFSARYFHQGDELFSYASEWRMLHAAHDHTGKTQVLEPYLQEEP
LGLGQLQDFLRNPVRHFFSQRLKVFFEVIEAPLADDEPFVLDALQRYSLSDSLLEAALVR
LDQPELALAAHAKRLQNSGLLPMAGFGECMQRELIEPLPDLLQRYQQLLALWPTPLTSAV
PVSLQLHGVSVEGWLSGLHQRSDGAVLAITAIPNSIGSIKTRKWHRLIRPWVNHLVACAN
GLSMTTALVASDDSLLLAPFDQPVAQRLLGDLLQAWQTGMRQPLPVAVKTAFAWLGQSDP
AKADAAARKAYEGDGQTSEGERRESPALARQFADFDVLTADETFPDWCNALYRPLLDAPW
RSLVSEEARS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcgacgtcccttagccctgctttcatggtggttcacgggaatcgccttgat
gagctgcgcagcctggtgatcagcttgatgcggcgttatccgctgggccctcttgaaaat
gaaattgcgctggtacaaagcaacggtatcgcccaatggctcaagttggcactggctgaa
gatccggaagacgacgacacgggcggctgcggtattgccgctgccattgatgtgcagttg
ccaggcagcttcatgtggcaactttatcgaatggttctgggacgtgacgagattccgatc
aagtccttgctggataaggcgccgctcacctggcgactgatgcgtctgctgccgcagttg
atcgagcagcctcatttcgagcctctgcggcgattccttacccacgacaccgacttgcgc
aagcgctatcaattgtccgagcgtcttgccgatctgttcgaccaataccaggtgtaccgg
gccgactggcttgaagactgggcggaaggtcgacaccagaccagaaacgtccgaggtgaa
atcaagccgctcgcgccagccaattgttggcaagctgaactgtggcgagccttgttactg
gacgtcggagaaaagggcatggcccagagccgtgctggcgttcaccagcgttacatcgag
cgtatcaacagcctggaggtcgcgccgaaaggtctgcccgcgcgggtgatcgtgtttggc
atttcttcgttgcctgcccaagccctcgaggcgctcgccggcctgtcccggttcagccag
gtcctgctgtgcgtccacaacccgtgtcgtcaccattgggcggacatcgtggccgacaag
gacttgctgcgtcaccaatacaagcgtcaggcacgcaagaccggcatgcccgtcgtcctc
gacccgcaaaccttgcatcagcatgctcatccgctattggctgcctggggcaagcagggg
cgtgactacatcaacctgctcgacagctacgatgaccccaacagctatcgctcggtattt
cgcgatggacgaatcgacctgttcagtgacgggaatcccacgaccctcctcagtcagttg
caagatgacatcctggagctgcgtcccctgaatgaaacccgggaacactggcctaccgtc
gatacggcacgagatgggtcagtccgttttcatattgcccacagcgctcagcgcgaggta
gaaattctccatgaccagttgctagcccactttagtgctgatccgaccctgcgccctcgg
gacatcatcgtcatggtcccggatatcgacagttatgccccgcatatccgtgcagtgttc
ggccaactggatagaaccgatccccgttttattccattcaccctgaccgaccagggccag
cgtggacgtgatccgctgcttatcgccgtcgagcacctgctcaagctgcctgacagccgc
ttcccggtcagtgaaatcctcgatttgctggatgtcccggcgttgcgtgagcgtttcggc
atcgatgaggctgacttgccgacactgcaccgctggatcgagggtgcgggcattcgctgg
ggcatgagcgccgaacaccgtgccgggttggggttgcctgcggaacttgagcagaacagc
tggcatttcggtctgcatcgtatgctgctggggtatgccgtcggcagttcgctcgcctat
gagggcatcgaaccctatgatgaaatcggcggccttgatgcagcgttgattgggcctttg
gttgccttgctggatgcgctggaagtcgcccataaggaactcacccaacccgcatcgccg
caggaatggggttcgcgtctgcacgacctggtgcaagtgtttttccaggcgagcaacgag
catgacgactacctgttggcccaactcgaagatttgcgcgaaacctggttggaaacctgt
gagtcagtggggctgcacgatgagttgccgctgacggtcgtgcgcgaagcctggttggcc
ggactggatcaaggtcgactgtcccaacgtttcctggccggggcggtcaacttctgtacc
ttgatgccgatgcgtgcgattcccttcaagctggtgtgcctgctgggaatgaacgatggc
gattacccgcgagcccagccccccttggatttcgatctcatgggcagcgactatcgccct
ggcgatcggtcccggcgtgaggacgaccgctacctgctattggaagcgctgctttcggcc
cgggaaaagctttatatcagttgggtggggcgcagcatccgcgataacagtgagcgcccc
gcatcggtgttgatcggtcagctgcgcgatcacctggccagtggatggcgactggcagat
gacagtaagaatcttctcgaagcactgactcaggagcaccctctgcaaccgttcagcgct
cgttattttcatcaaggcgatgagttgttcagttacgccagcgaatggcgaatgcttcac
gccgcccacgatcacaccggcaagacccaggtgctggagccctaccttcaggaagaaccc
ttgggccttggccagttgcaggacttcctgcgcaatcccgtccgccatttcttcagccag
cgactgaaagtattcttcgaggtcatcgaagcgccgctggccgatgatgaaccgttcgtt
ctcgatgccttgcaacgctacagcctgagcgacagcttgctcgaggccgcgctggttcgc
ctggaccagccggagcttgccttggccgcccacgccaaaaggctccagaacagcggcctg
ttaccgatggccggtttcggtgagtgcatgcagcgcgagttgatcgagcccttgcctgat
ctgctccagcgttaccaacagctcctggcgttatggcccacgccgctgaccagtgctgtg
cctgtcagcctgcaattgcatggggtaagcgtcgaaggctggctcagcggcctgcaccag
cgctccgacggtgcggtcctcgccattaccgcgattcccaatagcattggctctatcaag
acccgcaaatggcatcgcctgatacgtccctgggtcaaccatctggtggcctgcgctaac
ggtttgtcgatgacgacggcgctggtggccagtgatgacagcttgctgctggcgcctttt
gatcagccagtcgcgcagagactgctcggcgatttgttgcaggcttggcagaccgggatg
cgccagccgctaccggtcgcggtgaagactgcgtttgcctggctgggccagagcgatccg
gccaaagccgatgcggcggctcgaaaagcctacgaaggcgatggacagacctctgaaggc
gaacgacgggaaagtccggccttggcccgacagtttgcggattttgatgtcctgacggct
gacgaaacattccccgattggtgcaatgcgctttaccggcctctgctcgacgcgccatgg
cgttcattggtcagcgaggaggcacgctcatga
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