Pseudomonas viciae: EPZ47_04120
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Entry
EPZ47_04120 CDS
T07167
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvk03016
]
EPZ47_04120 (truB)
Enzymes [BR:
pvk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EPZ47_04120 (truB)
Transfer RNA biogenesis [BR:
pvk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EPZ47_04120 (truB)
Prokaryotic type
EPZ47_04120 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QBZ87917
UniProt:
A0A4P7PBV4
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All DBs
Position
942767..943684
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLLERPVTVGQADIEAVLPGFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFDGNTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggtatcatcctgctcgacaagccg
ttggggttcacttccaacgcggcgttgcagaaggttcgctggctgctcaatgccgagaag
gccgggcacaccggtagcctcgatccgttggccaccggcgtattgccgctgtgcttcggt
gaggcgaccaagttctcccagtacctgctcgattccgacaagggttatgaaaccctggcg
caactgggcaagaccaccaccacggcggacgccgagggtgaggttttgctggagcgcccg
gtgaccgttggtcaggctgatatcgaagctgtgctgccaggatttcgcgggcaaatcagt
cagataccgccgatgtactcggccctcaagcgtgatggccagccgttgtacaagctggcc
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgacggtaatactgcgcggcttgccgtggattgcagcaaaggcacctatatc
cgtaccctggtggaggatatcggcgagcagctcggctgtggtgcgtacgtggcagaattg
cgacggacccaggccggacctttcacgctggcccagacggtcacgctggaagagctcgaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgtttcctgatgccatcggacagc
gggttgctggactggccgctgttgcagttctcggaacacagtgcgttctactggctcaac
ggccagccggtacgtgcccctgatgcgccgaagttcggcatggttcgggtgcaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
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