Pseudomonas viciae: EPZ47_04130
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Entry
EPZ47_04130 CDS
T07167
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPZ47_04130 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvk03019
]
EPZ47_04130 (pnp)
03016 Transfer RNA biogenesis [BR:
pvk03016
]
EPZ47_04130 (pnp)
Enzymes [BR:
pvk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EPZ47_04130 (pnp)
Messenger RNA biogenesis [BR:
pvk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EPZ47_04130 (pnp)
Transfer RNA biogenesis [BR:
pvk03016
]
Prokaryotic type
tRNA degradation factors
EPZ47_04130 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QBZ87919
UniProt:
A0A4P7PBX1
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All DBs
Position
944292..946397
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQAEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSSAEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccaattcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgta
ttggtgaccgttgttggtgccaagcaagccgatccaggcaagggctttttccctctgtct
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaaaaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattcctttcgatggcccgatcggcgctgcccgcgtggcgttccacgaaagcacc
ggctacctgctgaacccaacctacgagcaactgaaagcttcgagcctggacatggtcgtg
gccggtacttccgaagccgtgctgatggttgaatccgaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgttcgcccacgacgagttccaggtggtgatcaacgccgtc
aaggaactggccgccgaagccgccaagccaacctggacctgggctccgcaagccgaagcc
accgaactgctgggcgctatccgtgccgagttcggcgaagcgatctcccaggcctacacc
atcaccgtcaaggctgaccgctatgcgcgtctgggcgagctgaaagaccaggtcgttgcc
aagctgtccggcgaagaaggccagccgtcttccgctgaagtcaaagctgctttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgatggtcgc
gacacccgcaccgtacgtccactgaacatcgaagttggtgttttgccaaagacccacggt
tcggcactgttcacccgtggcgaaacccaggccctggtcgttgccacgctgggcaccgcc
cgtgacgcgcaactgctggacaccctggaaggcgaaaagaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgccggtcgccgc
gaaatcggtcacggccgtttggcccgtcgttcggtccaggccatgctgcctgccgctgac
gtgttcccgtacaccattcgcgtagtctcggaaatcaccgagtccaacggttcgagctcg
atggcttcggtttgcggcgcttccctggccctgatggacgccggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggtgaaggaaggcgagaaattcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtggccggtaccgcc
aagggcgtcaccgcactgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgccctgggccaagccctggaagcgcgcctgaacatcctcggtcagatgaaccag
atcattggtcagtcccgtaccgaactgtcggaaaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgaccatccgtgcgatc
tgtgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagcggcagaagcagcacgccagcgcgttctgggtatcactgccgaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggacggtctggtccacatctccatgctgagcgatgctcgcgtc
gagaaagtgaccgacatcctcaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggtcgtatcaagctgtccatcaaagacgtggcagcagccaaggcatcgggc
gtttaa
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