Pseudomonas viciae: EPZ47_05280
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Entry
EPZ47_05280 CDS
T07167
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvk03009
]
EPZ47_05280 (der)
Ribosome biogenesis [BR:
pvk03009
]
Prokaryotic type
GTPases
EPZ47_05280 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
ABC_tran
Ras
AAA_22
DUF5906
AAA_24
NOG1
AAA_18
NTPase_1
SRPRB
cobW
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
QBZ88136
UniProt:
A0A4P7PCH4
LinkDB
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Position
1178831..1180303
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AA seq
490 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILVDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIAEHLRKRNKRSYVVANKV
DNIDPDMARAEFAPLGMGQAIPIAGAHGRGITQMLEIALADFPKDDEDEPEDGEEEIVAE
GEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFER
NEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLG
FALEAGRALVIAINKWDGMTPSERDFVKVELQRRLFFVDFADIHFISALHGTGVGNLYAS
VQNSFKSAVTRWPTNRLTQILEDAVGEHAPPMVNNRRIKLRYAHLGGANPPIIVIHGNQI
EKVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNTLTDRQVNKKRRLMSHHK
KADKKRRDKR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccgaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgcgacgccattgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggccaagtggcaagggcgtacctatattctggtcgacaccggcggcatc
tccggtgatgaacacggcatggatgaaaaaatggccgagcagtcgctgctcgccatcgaa
gaagccgatgtggtgctgttcctggtagacgccaaggccggttttaccgccgccgaccag
atgatcgccgagcatttgcgcaaacgtaacaagcgttcctacgtggttgccaacaaggtc
gacaacatcgacccggacatggcccgcgctgaattcgctccgttgggcatgggccaggcg
atcccgatcgccggtgcccacggccgtggcatcacccagatgctggaaatcgccctggct
gatttcccgaaagacgacgaagacgagcctgaagacggcgaagaagaaatcgttgccgaa
ggcgaggaagccaagcgcatccccggcccaagcgaaaaagacgggatcaagatcgccatc
atcggccgcccgaacgtgggcaagtcgacgctggtcaaccgtatgctcggcgaagaccgg
gtgatcgtgtacgaccaacccggcaccacccgtgacagcatctacatcccgttcgagcgt
aacgaagagaagtacacgctgatcgacaccgcaggtgtgcgcaagcgcggcaagatccac
gaagaagtcgaaaaattctccgtggtcaaaaccctgcaagcgatcaaagacgccaacgtg
gtgatcttcgtgatggacgcccgcgaaggcgtggtcgatcacgacctcaacctgttgggc
ttcgccctggaagccggtcgtgcgttggtcatcgcgatcaacaagtgggacggcatgacg
ccgagcgagcgcgatttcgtgaaggtcgaattgcagcgtcggctgttcttcgtcgacttc
gccgacatccacttcatctcggccttgcacggcacgggcgtgggtaacctctacgcatcg
gtgcagaactcgttcaagtcggcggtcacccgctggccgaccaaccgcctgacccagatc
ctcgaagacgccgtgggcgagcacgcgccaccgatggtcaacaaccgtcggatcaagctg
cgttacgcccacttgggtggtgccaacccgccgattatcgtgattcacggtaaccagatc
gagaaggtgcccaagtcgtacgtccgttacctggaaaacacctatcgtcgcgtcctgaag
ctggtcggcacgccgatccgcatcgagttcaagggcggcgagaacccgtacgaaggcaac
aagaacacgctcaccgaccgccaggtcaacaagaagcgccgcttgatgtcgcaccataag
aaggctgacaagaagcgtcgcgataagcgctga
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