Pseudomonas viciae: EPZ47_06225
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Entry
EPZ47_06225 CDS
T07167
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvk03009
]
EPZ47_06225 (rimO)
Enzymes [BR:
pvk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EPZ47_06225 (rimO)
Ribosome biogenesis [BR:
pvk03009
]
Prokaryotic type
ribosomal protein modification factors
EPZ47_06225 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
QBZ88318
UniProt:
A0A4P7PCQ4
LinkDB
All DBs
Position
complement(1364072..1365412)
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AA seq
446 aa
AA seq
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MSTTTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLAVTGPQQYEQVVNAVHDVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLDVVPDDVK
QDRWDRFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQIG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactaccgcgccagccaatccgaaggttggcttcgtatccctgggttgcccg
aaagctctggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgacgtt
gtgtccacgtatcaggacgccgatgtggtggtggtcaacacctgcggtttcatcgattcg
gccaaggccgagtccctggaagtgatcggcgaggccatcaaggaaaacggcaaggtcatc
gtcaccggttgcatgggcgtggaagaaggcaacatccgcaacgtgcacccgagcgtgctg
gccgtgaccggtccgcagcagtacgagcaggtggtcaatgccgtgcatgacgtggtacct
ccacgccaggaccacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgacc
ccgcgccactacgcgtacctgaagatttccgagggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtgagccgtccagtgggcgatgtgctcgacgaa
gcccaacgcctggtcaaggccggcgtcaaggaactgctggtgatctcccaggacaccagc
gcctacggtgtcgacgtgaaataccgcaccggcttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagccctcagcaccctcggcgtctgggtccgcctgcattac
gtctacccgtacccgcatgtcgacgaactgatcccgctgatggccgctggcaaaatcctg
ccgtacctggacattccgttccagcacgccagcccaaaagtcctcaaggccatgaagcgt
ccggcgttcgaagacaagaccctggctcgcatcaagaactggcgggaaatctgcccggac
ctgatcatccgctcgaccttcatcgtcggcttcccgggtgaaaccgaagaagacttccag
tacctgctggactggctgaccgaagcccaactcgatcgcgtcggctgcttccagtactcc
cctgtcgaaggcgcaccggccaacgacttggatttggatgtggtgccggacgacgtcaag
caggaccgttgggaccgcttcatggcgcaccagcaggccatcagctcggcccgcctgcaa
atgcgcatcggccgcgaaatcgaagtgctggtcgatgaagtggacgagcaaggcgccgtg
ggccgctgcttcttcgacgccccggaaatcgacggcaacgtgttcatcgacaacggcagt
aacctcaagccgggcgacaaggtctggtgcaaggtgaccgacgccgacgagtacgacttg
tgggctgaacagatcggttga
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