Pseudomonas viciae: EPZ47_07160
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Entry
EPZ47_07160 CDS
T07167
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvk03009
]
EPZ47_07160
Enzymes [BR:
pvk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EPZ47_07160
Ribosome biogenesis [BR:
pvk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EPZ47_07160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QBZ88492
UniProt:
A0A4P7PED1
LinkDB
All DBs
Position
complement(1553972..1554664)
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AA seq
230 aa
AA seq
DB search
MRVDRFLSNLPCFNRQQVRLLLVERRVRIDGQTVDDPHAQVREFSRVEVDEQVLQAGRPA
RYFMLHKPPGCVSATRDPQHPTVLDLLDEPDKDDLHIAGRLDFNTTGLMLITNDGSWSRR
LTQPQTKLPKVYYVETEQTITAEYAVTFARGLYFAFEDLTTQPAELTLLGPKSARLSIVE
GRYHQVKRMFGHFDNKVLRLHRERMGPLTLDAHLEPGQYRALSPGEVHLI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttgaccgcttcctcagtaatctgccgtgtttcaaccgccaacaggtccgcctg
ctgctggtggagcgtcgcgtgcggatcgacggccagaccgtcgacgatccccatgcacaa
gtgcgtgagttcagtcgggttgaagtcgatgagcaggtgctgcaagcgggccgcccagcg
cgctacttcatgctgcacaagccgcccggctgtgtcagcgccacccgcgatccgcagcac
cccaccgtgctcgacttactggacgaaccggacaaggacgacctgcacatcgccgggcgc
ctggacttcaacaccacagggctgatgctgatcaccaatgacggaagctggtcgcggcgc
ctgacccaaccccagaccaaactgcccaaggtctattacgtcgagaccgagcaaaccatc
accgccgaatatgccgtcaccttcgctcgcggcctgtacttcgctttcgaagacctcacc
acccaaccagcggagctaacactgctggggccaaaatcggcgcgcctgagcatcgttgaa
gggcgctatcaccaggtcaaacgcatgttcggccacttcgataacaaggtgttgcgcctg
caccgtgagcgcatggggccactgacgctggacgcccatctcgagccaggccagtaccgc
gccttgagccccggggaagtccatctcatttga
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