KEGG   Pseudomonas viciae: EPZ47_07415
Entry
EPZ47_07415       CDS       T07167                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
pvk  Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:pvk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pvk03016]
    EPZ47_07415 (rnd)
Enzymes [BR:pvk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     EPZ47_07415 (rnd)
Transfer RNA biogenesis [BR:pvk03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    EPZ47_07415 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: QBZ88540
UniProt: A0A4P7PD90
LinkDB
Position
1603971..1605104
AA seq 377 aa
MAIDIHWIRDNDSLGQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGKRAYLIDPL
TIDNWQPLAALLENPTVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVQLRPKLSNERYAWV
LEDGAELVANLRREVDPYEVYREAKLAWKLSRAQLAVLRELCAWREREARARDVPRNRII
REHSLWPLARTQPDNLGALAKIEDMHPRTVRQDGEFLLELIQRAASVSPEQWPPAVAEPL
PIEASALVKRLRALGQAEAERLGIAPELMLRKKTLEALLKSGFPEGPYQLPDSLRGWRRE
LMGQALLDSLATAGEQP
NT seq 1134 nt   +upstreamnt  +downstreamnt
gtggccatcgatattcactggattcgcgacaacgatagcctcggtcagttttgcgccgaa
tggcagcagttgccattcgtcgccctcgacaccgaattcatgcgggtcgacaccttttac
ccgattgccggtttgctgcagatcggtgatggcaagcgtgcctacctgattgaccccttg
accatcgacaactggcagcccctggccgcactgctggaaaacccgacagtgctcaaggtg
ctgcacgcctgcagcgaagaccttgaagtgctgctgcgtttaactggcagcctgcccgcg
cccctgttcgacactcaactggccgccgcttacctgaacctgggtttctccatgggttac
tcgcgactggtgcaggaagtgctcggcatcgaattgcccaagggcgagactcgctccgac
tggttgcaacggccgctgtccgagacgcagatcagctacgcggctgaagatgcggtgcat
ctggcggaggttttcgtacaactgcgtccgaagctttccaacgaaagatacgcctgggta
ctggaggacggcgccgaactggtggccaacctgcgtcgcgaagtcgacccctatgaggtg
taccgtgaggccaagttggcctggaaactttcccgtgcccaactggccgtgctgcgcgaa
ctgtgtgcctggcgcgagcgggaggcgcgtgcccgtgacgtgccgcgcaaccgtatcatc
cgcgagcattcgttatggcccctggctcgcacgcagccggataatctcggcgcgctggcg
aaaatcgaagatatgcacccgcgtaccgtacgccaggatggcgagtttctgttggagctg
attcagcgcgccgccagcgtgtcgcccgagcaatggccgccggcggtggctgagccgttg
cccatcgaggcctcggcgctggtcaagcgcctgcgggcgctgggccaggctgaagccgag
cgcctggggattgccccggagctgatgctgcgcaagaaaaccctcgaagcgctgctcaag
agcggctttcccgagggcccttaccaattacccgattcgctgcgtggctggcgccgcgaa
ttgatgggccaggcgctgctcgacagcctggccaccgccggagaacagccttga

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