Pseudomonas viciae: EPZ47_07835
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Entry
EPZ47_07835 CDS
T07167
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPZ47_07835 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvk03019
]
EPZ47_07835 (recQ)
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_07835 (recQ)
Enzymes [BR:
pvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EPZ47_07835 (recQ)
Messenger RNA biogenesis [BR:
pvk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EPZ47_07835 (recQ)
DNA repair and recombination proteins [BR:
pvk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EPZ47_07835 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HTH_23
Sigma70_r4_2
GerE
Motif
Other DBs
NCBI-ProteinID:
QBZ88619
UniProt:
A0A4P7PDK2
LinkDB
All DBs
Position
1707971..1710097
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLAASIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFIAERRSDAGIVYCLSRKK
VDEVAAFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATVAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIYRTG
QRYGVGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLE
GYGGLRLSASCRPLLKGEVTLELRRDLKPATAVKSSKSQASQLVRGEERDQWEALRALRR
KLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVLGGEVE
APKVVADVRHELITLARAGMTPLQIAGQLQCSEKNVYTMLAEAIGKQQLSLEQALDLPEE
LMGEVQDAFLDGEGELPPVTEVAALFVGRVPEGVLYCVRAALQSEFEV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcaacgcgtcctcaaggacatcttcggctacgacagtttccgtggc
cgccagggtgccattattgagcgcgtggccagcggtggcgatgccctggtgctcatgccc
accggcggtggcaagtccttgtgcttccaggtgccggcgctgttgcgcaatggcctggcg
gtggtggtctcgccgctgatcgcattgatggacgaccaggtcgcgacccttgaagaactg
ggtgttgccgctgcagcgctgaactccaccctcagcgccgagcagcagcgggacctggcg
gcgagcatcaagcgcggcgaagtgaagatgctgtacctggcaccggagcgcctggtgcag
ccgcgcatgctggcgttcttgcagagcctggaaattgccttgttcgccatcgacgaagcc
cactgtgtgtcccagtggggccacgatttccgtcgcgaatacctgcaattggggcaactg
gcggaactgttccccgatgtgccgcgcatcgccctgaccgccaccgccgacaaacgtacc
cgcgaagaaatcgtcgagcgcctgcatttgcagaacgccgagcggttcctgtccagcttt
gaccggccgaacattttctatcgcatcgtgcccaaggagcagccgcgcaagcagttgctg
gcgttcatcgccgagcggcgcagcgacgccggcattgtctactgcctgtcgcgcaagaag
gtcgacgaagtggcggcgttcctttgtgaacagggttttcctgcattgccgtatcacgcc
gggctgcccaacgacctgcgggcctatcaccagaagcgcttcctcaacgaggaaggcctg
atcatggtggccacggtggcgttcggcatgggcatcgacaagcccaacgtgcgtttcgtc
gcccacctggacttgcccaaatccctcgaggcctattaccaggaaaccgggcgtgccggc
cgtgatggcttgccggccgacgcctggatggcctacggcctgcaagacgtggtgatgctc
aagcagatgctgcagaactccgagggcgacgagcgccacaagcgcctggagcagcacaag
ctcgacgccatgctctcgctctgcgaagaaacccgctgccgtcgccagaccctgctggcc
tatttcgacgaagacatgccccagccttgcgggcattgcgacaattgcgtcgatggcgtg
gaaacctgggacgccaccgaaccggcccgccaggccttgtcggccatctatcgcaccggc
cagcgttatggcgtggggcatctggtggacgtattgctgggcaaggacaacgaaaaggtc
cgcagcttcggccaccagcatctttcggtattcggggtgggcaaggcccgcaccgagagc
gaatggcgttcactgttccgacaactggtagcccgtggtctggcggacatcgacctggaa
ggctacggcggcctgcgcctgagtgcgagttgccggcccttgctcaaaggcgaggtcacc
ctcgaactgcgccgcgacctcaagccggcgacggcggtcaagagcagcaagagccaggcc
agccaactggtgcgcggcgaagagcgcgatcagtgggaggccctgcgcgccttgcgccgc
aagttggccgaggaacacggcgtgccgccgtacgtcattttccccgactcgacgctgctg
gaaatgctccgcagccaaccgacgtccctggccgaaatggcccgggtcagtggtgtgggc
gcgcgcaagctggagcgttatggcgaggccttcctccaagtgctgggcggcgaggtcgag
gcgccgaaagtggtggccgatgtacgccacgaactgatcaccctggcccgggccggcatg
acgccgctgcagatcgccgggcaactgcaatgctctgagaaaaacgtctacacgatgctg
gccgaggccatcggcaaacagcagttatctcttgagcaggcactggacctgcccgaggag
ttgatgggcgaagtgcaggatgcgtttctggatggcgaaggcgagttgccgccggtgacg
gaagtcgctgcgctgtttgtcggccgggtccctgaaggcgtcctgtattgcgtcagggct
gcgttgcagtcggaattcgaagtttga
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integrated database retrieval system
