Pseudomonas viciae: EPZ47_07985
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Entry
EPZ47_07985 CDS
T07167
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pvk
Pseudomonas viciae
Pathway
pvk02020
Two-component system
pvk02025
Biofilm formation - Pseudomonas aeruginosa
pvk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EPZ47_07985
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EPZ47_07985
09142 Cell motility
02040 Flagellar assembly
EPZ47_07985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvk03000
]
EPZ47_07985
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pvk02035
]
EPZ47_07985
Transcription factors [BR:
pvk03000
]
Prokaryotic type
Helix-turn-helix
Other families
EPZ47_07985
Bacterial motility proteins [BR:
pvk02035
]
Flagellar system
Flagellar assembly proteins
Others
EPZ47_07985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
AAA_19
GAAD
Motif
Other DBs
NCBI-ProteinID:
QBZ88648
UniProt:
A0A4P7PDI2
LinkDB
All DBs
Position
1741576..1743051
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPATLLGLLKTLSTWDEFLPVLLMGENSSLDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEIGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVTELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPD
FTANALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctcctgatcgatgacgatagcgtccgccgccgtgatctg
gcggtgatcctgaattttcttggcgaagaaaatttaccctgcggaagccatgactggcag
caggccgtcggctctttgtcgtccagtcgcgaagtcatttgtgtcctgattgggaccgtt
aatgcgcccgcgactcttttgggcttgctaaagacactctcgacctgggatgagttcctt
ccggttttgttaatgggcgaaaattcttcccttgacttgcctgaagaccagcgtcgccgg
gttctgtccacgctcgaaatgccgcccagttacagcaagttgctggattcgctgcaccgc
gcccaggtttatcgcgagatgtacgaccaggcccgcgagcgcggcaggcatcgtgaaccc
aatcttttccgcagccttgtcggcaccagccgggcgatccagcacgtgcgccagatgatg
cagcaggtggccgacaccgacgccagcgtgttgattcttggcgagtcgggcaccggcaag
gaagtggtcgcgcgcaatctgcattaccactccaagcgccgcgaagcgccgttcgtaccg
gtcaactgtggcgcgatcccggccgagttgctggaaagtgaactgttcggccacgagaag
ggcgccttcactggcgcgatcaccagccgggccgggcgttttgagctcgccaacggcggc
acgctgtttctcgatgaaatcggcgacatgccgttgccgatgcaggtcaagctgctgcgg
gtcctgcaggagcgtacgttcgagcgcgtgggcagcaacaagacccagagcgtcgatgtg
cggatcattgccgcgacccacaagaacctcgagagcatgatcgagatcggcagcttccgc
gaagacctctattaccgcctcaacgtattcccaatcgaaatggcgccactgcgtgagcgg
gtcgaagacatcccgctgttgatgaacgaactgatttcacgcatggagcacgaaaagcgc
ggttcgatccgcttcaactcggcggcgatcatgtccctgtgccgccatggctggccgggc
aacgtccgggagctggccaacctggtggagcgcatggcgatcatgcatccgtacggggtg
atcggcgtgaccgagttgccgaagaaattccgctacgtcgatgacgaagacgagcagatg
gtcgacagcctgcgcagcgatctggaagagcgggtggccataaacggccatacgccggac
ttcaccgccaatgccttgctgccgcccgaaggcctggacctcaaggattatctgggtggc
ctggaacaagggcttatccagcaggctttggacgacgccaacgggattgtcgcccgtgcc
gcggagcgcctgcgtatccggcgcaccaccctggtggaaaagatgcgcaagtacggcatg
agccgtcgcgaaggagatgaacaggcggatgattga
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