Pseudomonas viciae: EPZ47_08380
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Entry
EPZ47_08380 CDS
T07167
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvk03032
]
EPZ47_08380 (gyrA)
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_08380 (gyrA)
Enzymes [BR:
pvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EPZ47_08380 (gyrA)
DNA replication proteins [BR:
pvk03032
]
Prokaryotic type
DNA Topoisomerases
EPZ47_08380 (gyrA)
DNA repair and recombination proteins [BR:
pvk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EPZ47_08380 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QBZ88726
UniProt:
A0A4P7PDY1
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All DBs
Position
1822070..1824733
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AA seq
887 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VVAMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASARGYGKRTAISEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVAEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSEVEGEELEGEEGVAFDGTLGADVDDMTGDQPLDAAADEEEPQD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcaatgagcgtaatcgtcgggcgggcgctgccggatgcgcgcgatggc
ttgaagcccgtgcaccggcgcgtgctgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatccgcccgtgtcgtcggcgacgtgatcggtaagtatcacccccac
ggtgacaccgccgtgtacgacaccatcgtgcggatggcccagccattttccctgcgctac
ctgttggtagacggccagggcaacttcggttccgtggacggcgacaacgccgcagccatg
cgatacaccgaagtgcgcatgaccaagctggcccacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaaatgatcccggcggtcatgccg
acccgtatccccaacctgctggtcaacggctccagcggtatcgccgtgggcatggcgacc
aacatcccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaat
cccgagctgacggtcgatgagctgatgcaatacatccccggtccggacttcccgaccgcc
gcgatcatcaacggtcgtgccggcatcatcgaagcctaccgcaccggccgtggccgcatt
tacatgcgcgcccgttcgaccatcgaagacatcgacaaggtcggtggtcgccagcagatc
gttatcaccgagctgccgtaccagctgaacaaggcccgcctgatcgagaagatcgccgag
ctggtgaaagagaagaaactcgaaggcatcaccgagctgcgtgacgagtccgacaaggac
ggtatgcgcgtcgtgatcgagctgcgccgtggcgaagtgcctgaggtgattctcaacaac
ctctacgcccagacccagctgcaagcggtgttcggtatcaacatcgtggcgctgatcgac
ggccgtccgcggatcctgaacctcaaggacctgctggaagccttcgtgcgtcaccgtcgc
gaagtggtcacccgtcgcaccgtgttcgagctgcgcaaggcccgcgagcgtggtcacatc
ctcgaaggccaggccgttgccctgtcgaacatcgacccggtcatcgccctgatcaaggcc
tcgccaacgccgtcggaagccaaggaagcgctgatcagcacgccttgggagtcctccgcg
gtggtggcgatggtcgagcgtgccggggccgattcgtgccgtccggagaacctcgatccg
caatacggcctgcgcgagggcaagtacttcctgtccccggaacaggcccaggccatcctg
gaactgcgtctgcaccgcctgaccggcctggagcacgagaaactgctggccgagtaccag
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccacgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgagtacggcgacgtgcgccgcacc
gagattctcgatgcgcgtctggacctgaccctgggtgacatgatcccggaagaagagcgc
gtggtgaccatttcccacggtggctacgccaagacccagccgctggccgcctaccaggcc
cagcgtcgtggcggcaaaggcaagtcggcgactggcgtcaaggacgaggactacatcgct
cacctgctggtcgccaacagccacaccacgctgttgctgttctccagcaagggcaaggtg
tactggctgaaaacctacgaaatccctgaagcgtcccgtgcggctcgcggtcgtccgttg
gtcaacctgctgccgctggacagtgatgaatacatcaccaccatgttgccggtggaggaa
tacaccgaaggtcacttcatcttcatggctaccgccaaaggcaccgtgaagaagaccccg
ctggaatccttcagtcgccagcgcagcgttggcctgatcgctctcgaattggacgaaggc
gatgtgctgatttccgccgccatcaccgacggcgagcgagaagtcatgctgttctccgac
ggcggcaaggtcacccgcttcaaggaatccgacgtccgtgccatgggccgtaccgcccgc
ggtgtgcgcggcatgcgcctgccggaaggccagaagctgatttccatgctgatccccgaa
gaaggcagccagatcctcaccgcttcggcgcgtggttatggcaagcgcaccgctatcagc
gagttccctgagtacaagcgtggcggccagggcgtgatcgccatggtcagcaacgatcgt
aacggtcgtctggttggcgctgtccaggtactcgatggtgaagagatcatgttgatctcc
gaccagggcaccctggtgcgcacgcgagtcgccgaagtgtcgagcctggggcgtaacacc
cagggcgtgacgctgatcaagctggccagcgatgaaacgctggtagggcttgagcgggtc
caggagccatcggaagtcgaaggcgaggaactggaaggcgaggaaggcgtggcgttcgac
ggcaccctcggtgccgatgtcgacgacatgactggcgaccaaccgctcgacgctgctgct
gacgaagaagaaccgcaggactaa
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