Pseudomonas viciae: EPZ47_09480
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Entry
EPZ47_09480 CDS
T07167
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk00071
Fatty acid degradation
pvk00280
Valine, leucine and isoleucine degradation
pvk00310
Lysine degradation
pvk00362
Benzoate degradation
pvk00380
Tryptophan metabolism
pvk00410
beta-Alanine metabolism
pvk00640
Propanoate metabolism
pvk00650
Butanoate metabolism
pvk00907
Pinene, camphor and geraniol degradation
pvk00930
Caprolactam degradation
pvk01100
Metabolic pathways
pvk01110
Biosynthesis of secondary metabolites
pvk01120
Microbial metabolism in diverse environments
pvk01200
Carbon metabolism
pvk01212
Fatty acid metabolism
Module
pvk_M00087
beta-Oxidation
pvk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EPZ47_09480 (fadB)
00650 Butanoate metabolism
EPZ47_09480 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EPZ47_09480 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EPZ47_09480 (fadB)
00310 Lysine degradation
EPZ47_09480 (fadB)
00380 Tryptophan metabolism
EPZ47_09480 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EPZ47_09480 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EPZ47_09480 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EPZ47_09480 (fadB)
00930 Caprolactam degradation
EPZ47_09480 (fadB)
Enzymes [BR:
pvk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EPZ47_09480 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EPZ47_09480 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EPZ47_09480 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EPZ47_09480 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QBZ88935
UniProt:
A0A4P7PER5
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All DBs
Position
2076730..2078877
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELIAGNLEANRIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMSTVAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KIGAVDAVVEPGKLQEAALETLKRAISGEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aagttcgatctcaagggtgagtccgtcaacaagttcaatcgtctaaccctgaatgaattg
cgtcaggcagtggacactatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagc
ggcaaggacgtcttcatcgtcggcgccgacatcaccgaattcgtcgataacttcaagctg
cccgatgccgaactgatcgctggcaacctcgaagccaaccgtatcttcagcgacttcgaa
gacctcaacgtaccgaccgtcgtggccatcaacggcatcgccctgggtggcggcctggaa
atgtgcctggcagcggattaccgcgtcatgtccaccgtggccaagatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggcggtaccgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgcgctgaagacgcgctg
aaaatcggcgcggtggatgccgtggtcgagcctggcaaactccaggaagcggcccttgaa
acgctcaagcgtgccatcagcggcgagttcgactacaaggccaagcgtcagccaaagctg
gacaagctcaagctcaacgctatcgaacaaatgatggccttcgaaaccgccaagggtttc
gttgcaggccaggccgggccgaactacccggcaccggttgaagcgatcaagaccatccag
aaagccgcgaactttggtcgcgacaaagccctggaagtcgaagccgccggcttcgtcaag
ctggccaagacctcggctgcgcaaagcctgatcggtctgttcctcaatgaccaggaactg
aagaagaaggccaaggcctacgatgaaatcgcccgtgacgtgaagcaggccgctgtactc
ggcgccggcatcatggggggcggcatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggcatcgaacagggcctggccgaagccgccaagctg
ctggttggccgcgtcgataaaggtcgcatgactgctgcgaagatggccgaagtgctcaac
ggcattcgcccaaccctgtcctacggtgatttcggccatgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaggcggtactggctgaagtcgaagacaaggtcaaa
gaggacaccatcctcgcctcgaacacctcgaccatttccatttcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaactggccgttgccaccaccgtcgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgattgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgctggtgtggac
tttgtgcgcatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgcgatgtaatggctgaaggcttc
ccggaccgcatgaaagatgaccgtcgttcggctgtcgacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagcag
aagaaagtcgccgattcgtcggtgctggaagtgctcaagccgatcgtctatgagcagcgc
gacgttaccgacgaggacatcatcaactggatgatgatcccgctgtgcctcgaaaccgtg
cgttgcctggaagatggcattgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatcggtgtg
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgact
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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