Pseudomonas viciae: EPZ47_11720
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Entry
EPZ47_11720 CDS
T07167
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvk03032
]
EPZ47_11720
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_11720
Enzymes [BR:
pvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EPZ47_11720
DNA replication proteins [BR:
pvk03032
]
Prokaryotic type
DNA Topoisomerases
EPZ47_11720
DNA repair and recombination proteins [BR:
pvk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EPZ47_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QBZ89347
UniProt:
A0A4P7PFB7
LinkDB
All DBs
Position
complement(2545363..2546418)
Genome browser
AA seq
351 aa
AA seq
DB search
MPDTLPPDALPADLHYVDDTAPGITRKKLRGKFCYFDPQGQRITDAAEIQRINALAVPPA
YTEVWICTDPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRMLEFGHTLPRLRKRLE
EILATPGFSRDKVMATVITLLDKTLIRVGNTQYARDNRSYGLTTLRTRHVEVNGSAIAFQ
FRGKSGVEHQITVKDRRLARVIKRCQEIPGQNLFQYLDEDGERHSISSSDINAYLKTLTG
ADFTAKDYRTWAGSAAALAGLRALRWETETEAKKHVTEMVRQVSRQLGNTPSVCRKCYIH
PAVVEGFLLGTLRELPKPRVRKGLSAEEAGLTMFLQRMTQAAEACEQKQSA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccctgccgccggatgcactgccggccgatttgcattacgtcgacgacacc
gcccccggcatcacccgtaaaaaactgcggggcaagttctgttatttcgacccgcagggc
cagcgcattaccgacgccgccgaaatccagcgcatcaacgccctggcggtgccgccggcc
tacaccgaggtgtggatctgcaccgacccgcgcggccatctccaggccaccggtcgcgat
gcccgagggcgcaagcaataccgttaccatgcgcgctggcgtgaggtgcgcgacgcggac
aagtattcgcgcatgctcgaattcggacacaccctgccccgcttgcgcaaacgcctggaa
gaaatcctcgccacacctggcttcagccgcgacaaggtcatggccacggtcattaccttg
ctggacaagaccctgatccgggtcggcaatacccagtacgcccgggacaatcgctcctac
ggcctgaccaccttgcgcacccggcatgtcgaggtcaacggcagtgccatcgccttccag
ttccgtggcaagagcggcgtcgaacaccagatcaccgtaaaagaccgacgcttggcgcga
gtcatcaaacgttgccaggagatacccgggcagaatctgttccagtacctggacgaggat
ggtgagcgccactccatcagttcatcggacatcaacgcctacctcaagaccctcactggc
gctgatttcacggccaaggattaccgcacatgggccggcagcgcagcggcgctggccggg
ttgcgggcgctgcgctgggaaaccgagaccgaggcgaagaaacacgtcaccgagatggtc
aggcaggtgtccaggcaactgggcaacacgccgagcgtctgtcgcaagtgctacattcat
cctgcggtggtcgagggtttcctgctcgggaccctgagggaattgcctaaaccccgggta
cgcaaaggcctcagcgcggaagaagccgggctgacgatgtttttgcagcgcatgacccaa
gccgccgaggcctgcgagcagaagcaatcggcttga
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