Pseudomonas viciae: EPZ47_12335
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Entry
EPZ47_12335 CDS
T07167
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pvk
Pseudomonas viciae
Pathway
pvk02010
ABC transporters
pvk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EPZ47_12335
03070 Bacterial secretion system
EPZ47_12335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvk02000
]
EPZ47_12335
02044 Secretion system [BR:
pvk02044
]
EPZ47_12335
Transporters [BR:
pvk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EPZ47_12335
Secretion system [BR:
pvk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EPZ47_12335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_22
AAA_16
AAA_29
AAA_18
MeaB
DUF87
AAA_30
PRK
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QBZ89464
UniProt:
A0A4V1CAM9
LinkDB
All DBs
Position
complement(2682248..2684383)
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AA seq
711 aa
AA seq
DB search
MNEQQANVDAPVDTGLICLVMLARLHNVAISAEQLTHEFCSEGGLFSSREMLLAAQRVGL
KAKSVQTTVSRLEHTPLPAIATDHNGEFFIIAKVDQSKAVIHDPRVARAEIIALETLQGR
WSGTLILVRSDANLQRENSRFDFTWFIPAIVKYRKLLGEVLLVSFVLQVFALVTPLFFQV
VMDKVLVHHGLTTLDVVAIGLLGIMVFESALSGLRTYLFAHTASRIDVELGSRLFRHLLN
LPLAYFQARRVGDSVARVRELENIRSFLTGNAITVVLDVLFSVVFIVVMFYYSAWLTLIV
LLSLPLYFLVSLIVTPLLRARLQDSFNRGAQNQAFLVETVNGIDTLKSMAVEPQVARKWE
DQIAGYVAAGFKTQNLSAIANESVSFIGKLVTVATLWMGARLVIEGQLTVGALIAFNMMA
GRVSQPIMRLAQLWTSFQQTGVSVQRLGDILNTHTELSQTARSALPSLQGHIEFDQVHFR
YRLDGSEVLRGVSVQIQAGQVIGVVGRSGSGKSTLTRLLQRLYVPERGRVLVDGMDLALA
DVSSLRRQIGVVLQDNMLFNRSIRENIALTDPGCPLENVMHAAKMAGAHEFILELPEGYD
TEVGEHGASLSGGQRQRIAIARALIGNPRILIFDEATSALDYESERVIQQNMQSICAGRT
VIIIAHRLSAVRDAHRILVVDRGQIVEQGTHLELLAHQAGHYSRLHRMQQS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacaacaagcaaacgttgatgcgccagtagatacaggccttatctgcctggtc
atgcttgctcggttgcacaacgttgctatcagtgctgagcaactgactcatgagttttgc
agcgagggcggcctttttagctcacgagagatgctgctagccgctcaacgagtaggtctt
aaggccaagtccgtacagacgactgtaagccgtctggaacatacccctcttcccgcgatt
gccactgatcataacggtgagtttttcattatcgccaaggtcgaccaaagcaaagcggtt
atccatgacccccgtgtggcacgagcagagatcatagcgctggaaacgttgcagggacgg
tggtcgggcactttgatcctggtacgctctgatgcgaacctacagcgtgaaaactcccgt
ttcgactttacctggttcattcctgccatcgtcaaatatcgcaagctattaggcgaagta
ctgctggtctcctttgtactacaagtgtttgcattggtcacaccgctgttttttcaagtg
gtcatggacaaagtcctggtgcaccacgggctgaccacgttggacgtcgtcgccatcggt
ctactggggatcatggtgtttgagtccgcattgagtgggctgcgcacttacctattcgcc
cataccgccagccgtatcgacgtagaactaggttcgcggttgtttcgtcatttgttgaac
ttgcccttggcgtattttcaggctcgacgtgtgggggattcggtagcgcgtgttcgtgaa
ctggaaaacatccgcagctttcttaccgggaacgctatcaccgtcgttcttgatgtgttg
ttctcggtagtgttcatcgtcgtgatgttctattacagcgcctggttaacattgatcgtc
ctactatccctgcccctgtatttcctggtgtctcttattgtgacccctctgctacgagct
cgattacaggacagtttcaatcgtggagcccagaatcaggcttttctggtggagaccgtg
aatggtatcgacactctaaagtccatggcggttgagcctcaagtggcacgcaaatgggaa
gaccagattgcgggatacgttgcagcggggttcaagacacaaaacctatcggcgattgcc
aatgaaagcgtgtctttcattggcaagctagtgaccgtcgcgacactctggatgggcgcg
cggttggtgattgagggtcaattgacggtaggtgcgctaattgccttcaacatgatggcc
ggtcgagtatcccaaccaattatgcgtcttgcccagctatggaccagcttccagcaaacc
ggggtgtcagtgcagcgtctgggggacatcctcaatacccacaccgagctgtcccaaacg
gcgcgcagcgcattaccctcacttcagggtcacatcgaatttgatcaagtgcatttccgt
taccgcctcgatggatcagaggttttgcgaggcgtcagtgtgcagatccaggctggccaa
gtaattggtgtcgtaggtcgttcaggctcaggaaaaagcactctgacacgcctgttacag
aggctttatgtcccggagcgtggacgcgtgctagttgatggcatggatctggcgctggcc
gacgtgtcgtcattacgccgacagatcggcgtagtacttcaggacaacatgctgttcaac
cgcagcatccgtgaaaacatcgcattgactgaccctggctgcccactagagaacgtcatg
catgccgccaaaatggccggcgcgcacgaatttatcctcgagctaccggaaggctacgac
actgaagtcggtgaacatggtgcttcgctctccggcggccagcggcaacggatcgctatt
gctcgggcgttgatcggcaatccacgcattctgattttcgacgaagccaccagtgctctg
gattatgaatcagagcgggtcattcaacagaacatgcaaagtatttgtgctggtcgcacg
gtgatcatcattgcccaccggctgtcagcagtacgcgacgcccaccgtattcttgtagtg
gatcgcgggcagatcgttgagcaaggtacccatctcgagttgctggcccaccaagcgggg
cattattcacgcttacaccgcatgcagcagagttga
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