Pseudomonas viciae: EPZ47_12455
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Entry
EPZ47_12455 CDS
T07167
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pvk
Pseudomonas viciae
Pathway
pvk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EPZ47_12455 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvk02044
]
EPZ47_12455 (tssB)
Secretion system [BR:
pvk02044
]
Type VI secretion system
Imp/Vas secretion system core components
EPZ47_12455 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
QBZ89488
UniProt:
A0A4P7PFN3
LinkDB
All DBs
Position
complement(2710615..2711175)
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AA seq
186 aa
AA seq
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MAESTQHKLDRVRPPRVQITYDVEIGNAIEKKELPLVVGILADLSGKPLDPLPKLNERRF
TEIDRDNFNEVLASISPRATLQVNNTLSGDDSKLNIELNFRHIDDFDPVKVVEQVTPLRR
LFEARQRLRDLLTKLDGNDDLDKLLRDVIANTEGLQEIKSARPQDATTELPTVAANDDPA
PTEPQA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtacccagcacaagctcgacagagtccgtcctccccgcgtccagatcacc
tatgacgtggaaatcggcaacgccatcgagaaaaaggaattgccactggtggtcggcatt
ctggccgacctttcgggcaagccactggacccgctgcccaagctcaatgagcggcgcttc
acggaaatcgatcgggataatttcaacgaggtgctcgcctccatctccccccgcgccacg
ctccaggtgaacaacaccctcagcggcgacgacagcaagctcaacatcgaactcaacttc
cggcacatcgacgacttcgatccggtcaaggtcgttgagcaggtcacgccgctgcggcgc
ctgttcgaagcgcgccagcgcctgcgggacctgttgaccaagctcgatggcaacgacgac
ctggacaagctgctgcgcgacgtgatcgccaacaccgaaggcctgcaagagatcaagtcg
gcccgccctcaggacgcaacgaccgagctgcccaccgtggccgccaacgatgacccggcc
ccgaccgaaccacaggcctga
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