Pseudomonas viciae: EPZ47_12470
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Entry
EPZ47_12470 CDS
T07167
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pvk
Pseudomonas viciae
Pathway
pvk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EPZ47_12470 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pvk02044
]
EPZ47_12470 (tssK)
Secretion system [BR:
pvk02044
]
Type VI secretion system
Imp/Vas secretion system core components
EPZ47_12470 (tssK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
DUF7019
Motif
Other DBs
NCBI-ProteinID:
QBZ89491
UniProt:
A0A4P7PFV1
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All DBs
Position
2711916..2713247
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AA seq
443 aa
AA seq
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MSLLPDAVCWHEGMQLLPQHFQLQGLRAEALAAHFAGACNPWFWGVSQLEVDPSALSAGQ
VRLLQLQGTLPDGLPVNLQAGVGPTLELDISEAVNKTDDATVTVYLAISPLWRAGQLLPL
KGRLQSVVGEALPDLTSGEFPESITVWRPNPRLCTQLSKADSICLPLLRIRKEGGGFLRV
PYTPPTPVLLPESPLGRRVAGLCARAREKCLFLAGRLRQAQAAGNQDDAMEIRRQLTALW
SRLPEVEGALNTRVATPQALYGLLLGLAGTWSALDSLAGVPAFAPLDFLELQRGYEPLLD
WLEDTLELVRAGYRSLAFERNDQVFSIQLPDDQPNQRLVIGLRMPNGASEQAAAEWLRGA
IIASAPHVVLLSRQRMSGLPHQAMSRNEQVAYSVGDDTRLFVVSASGQWFDGQLPLHIVA
PASTQASSPWQVVLFVAQAGESA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttacctgacgcggtgtgctggcatgagggcatgcagttgctgccccaacat
ttccaattgcaagggttgcgcgccgaggccctggccgcgcattttgccggggcctgcaat
ccctggttctggggcgtcagccagttggaagtcgacccttcggccctgagcgccggccag
gtgcggctgttgcagctgcaaggcaccttgcccgatggcttgccggtcaacctgcaggcc
ggtgtcgggccgaccctggagctggacatcagcgaggcggtcaacaagaccgacgatgcc
accgtgaccgtgtacctggccatcagcccgctctggcgcgccgggcaattgctgccactc
aaggggcgcttgcaatcggtggtcggcgaggcgttgccggacctcaccagtggcgaattt
cccgagtcgatcaccgtctggcgaccgaacccgaggctttgcacgcagttgagcaaggcc
gattcgatctgcctgccgctgttgcgcattcgcaaggagggcggtggctttttgcgggta
ccctacacgccgcccacgcccgtcctgctgccggagtcgccgctcggtcggcgcgtcgcc
gggctgtgtgcccgggcccgggaaaaatgcctgttcctcgccggtcggttgcgccaggcc
caggcggcgggcaaccaggacgatgccatggagatccgccggcaactgaccgcattgtgg
tcacgcttgccggaggtcgaaggcgcgctgaacacccgggtcgcgacaccccaggcgctc
tacggtttgctgctggggctggccggtacctggtcggccctcgactcactggccggcgtg
ccggccttcgcgcccctggactttctggagttgcagcgcggctacgagccgctgctcgac
tggctggaagacaccctggaactggttcgtgccggctatcgcagcctggccttcgagcgc
aatgatcaggtcttctcgatccagttgcccgacgatcagccgaaccaacgcctggtgatt
ggcctgcgcatgcccaacggcgccagcgagcaggccgcagccgagtggttgcgtggggca
atcattgcgtctgcgccgcatgtcgtgctcttgagtcggcaacgcatgagcggtttgccc
catcaggccatgagccgcaacgaacaggtggcctacagcgtgggcgacgacactcgattg
tttgtggtgagcgccagcgggcagtggttcgacgggcagttgccactgcacatcgtggcg
ccggcgtcgacccaggccagtagcccgtggcaagtggtgttgtttgtggcgcaagccggt
gaaagtgcctga
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