Pseudomonas viciae: EPZ47_13580
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Entry
EPZ47_13580 CDS
T07167
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pvk
Pseudomonas viciae
Pathway
pvk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EPZ47_13580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_13580
DNA repair and recombination proteins [BR:
pvk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EPZ47_13580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QBZ89706
UniProt:
A0A4P7PGI3
LinkDB
All DBs
Position
complement(2974641..2975519)
Genome browser
AA seq
292 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATASQGVDFDWLDKRSMDPVGYKRVNKVTGKEVTKED
IVKGVQYQKGQYVLLSEEEIRSAHPKSTQTIDIFSFVDSEKIPLQNIDTPYFLAPDKRGG
KVYALLRETLIKSNKVALALVVLHTRQHLAALMPLESALVLVMLRWPAEVRELDILELGD
EVTHPTLAKGELEMAKRLVQDMSADWSPEEYRDSFQDKIMELVEKKAKEGRLEAVETDPG
EEQRKSADVIDLTELLKRSLGGKGKSPAKPAAKPAKSTKSAPAKKTTKTSRG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaatctggaaaggcgcaatcagcttcggactggtccacattcctgtggcg
ctggtgtcagccaccgcctcccagggcgtggatttcgactggttggacaagcgcagcatg
gacccggtgggctacaagcgggtcaacaaggtcacgggcaaggaagtcaccaaggaagac
atcgtcaagggcgtccaataccagaaaggccaatacgtgctgctcagcgaagaggaaatc
cgctccgcccacccgaagtccacacagaccatcgatatcttttcctttgtcgacagcgag
aaaatcccactgcaaaacatcgacacaccctactttcttgcccccgacaagcgtggcggc
aaggtctacgccttgctgcgcgaaaccctgatcaagagcaacaaggtggccctggccctg
gttgtgctgcacacccgccagcatctggccgccctcatgcccctggaatcggccctggtc
ctggtcatgctgcgctggccggcagaagtgcgtgaactcgacatcctggaactgggcgat
gaagtgacccacccgaccctggccaagggcgagctggagatggccaagcgcctggtgcaa
gacatgagcgccgactggtctccggaagaataccgcgacagtttccaggacaagatcatg
gaactggtagagaaaaaggccaaggaaggtcgactcgaagccgtggaaaccgacccgggc
gaagagcaacgcaagagcgccgatgtcatcgacctcaccgaactgctcaagcgcagcctg
ggcggcaaaggcaagtcgccggccaagcccgcagcaaaaccggcgaagagcaccaagtcc
gcccccgctaaaaaaaccacaaagacctcccggggttga
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