Pseudomonas viciae: EPZ47_24135
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Entry
EPZ47_24135 CDS
T07167
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvk03019
]
EPZ47_24135
03009 Ribosome biogenesis [BR:
pvk03009
]
EPZ47_24135
03036 Chromosome and associated proteins [BR:
pvk03036
]
EPZ47_24135
Enzymes [BR:
pvk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EPZ47_24135
Messenger RNA biogenesis [BR:
pvk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EPZ47_24135
Ribosome biogenesis [BR:
pvk03009
]
Eukaryotic type
90S particles
RNase
EPZ47_24135
Prokaryotic type
rRNA processing factors
EPZ47_24135
Chromosome and associated proteins [BR:
pvk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EPZ47_24135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
QBZ91657
UniProt:
A0A4P7PL90
LinkDB
All DBs
Position
complement(5457128..5457817)
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AA seq
229 aa
AA seq
DB search
MSASLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSGMEMARERVLAWLTSEIDSLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcttctctaagtcgtctcgagcgtcagctcggctacaccttcaaggaccaggaa
ctgatggtcctggccctcactcaccgcagttttgccgggcgcaacaacgaacgcctggag
ttcctcggtgatgccatcctcaacttcgtggctggcgaggcgctgttcgagcgtttcccg
ttggcccgcgaaggccagctgtcgcgtttgcgcgcacgattggtaaaaggtgagaccctg
gccgtgctggcccgtggttttgacctgggcgaatacctgcgcctggggtccggtgaattg
aagagcggcggtttccgtcgcgagtcgattctggccgacgccctggaggcgttgattggc
gcgatctatctggactcgggcatggagatggcgcgcgagcgcgtgctggcctggctgacc
tccgagatcgacagcctgacgctggtggacaccaacaaggacccaaagacccgactgcag
gaattcctgcaatcgcgcagttgcgaactgccgcgctacgaagtggtggatatccagggc
gagccgcattgccgaacgttcttcgtcgaatgcgaagttgtcctactgaatgaaaaaagc
cgaggtcagggtgtgagtcgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga
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integrated database retrieval system