KEGG   Pseudomonas viciae: EPZ47_24135
Entry
EPZ47_24135       CDS       T07167                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pvk  Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:pvk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvk03019]
    EPZ47_24135
   03009 Ribosome biogenesis [BR:pvk03009]
    EPZ47_24135
   03036 Chromosome and associated proteins [BR:pvk03036]
    EPZ47_24135
Enzymes [BR:pvk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     EPZ47_24135
Messenger RNA biogenesis [BR:pvk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EPZ47_24135
Ribosome biogenesis [BR:pvk03009]
 Eukaryotic type
  90S particles
   RNase
    EPZ47_24135
 Prokaryotic type
  rRNA processing factors
   EPZ47_24135
Chromosome and associated proteins [BR:pvk03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     EPZ47_24135
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm
Other DBs
NCBI-ProteinID: QBZ91657
UniProt: A0A4P7PL90
LinkDB
Position
complement(5457128..5457817)
AA seq 229 aa
MSASLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSGMEMARERVLAWLTSEIDSLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgcttctctaagtcgtctcgagcgtcagctcggctacaccttcaaggaccaggaa
ctgatggtcctggccctcactcaccgcagttttgccgggcgcaacaacgaacgcctggag
ttcctcggtgatgccatcctcaacttcgtggctggcgaggcgctgttcgagcgtttcccg
ttggcccgcgaaggccagctgtcgcgtttgcgcgcacgattggtaaaaggtgagaccctg
gccgtgctggcccgtggttttgacctgggcgaatacctgcgcctggggtccggtgaattg
aagagcggcggtttccgtcgcgagtcgattctggccgacgccctggaggcgttgattggc
gcgatctatctggactcgggcatggagatggcgcgcgagcgcgtgctggcctggctgacc
tccgagatcgacagcctgacgctggtggacaccaacaaggacccaaagacccgactgcag
gaattcctgcaatcgcgcagttgcgaactgccgcgctacgaagtggtggatatccagggc
gagccgcattgccgaacgttcttcgtcgaatgcgaagttgtcctactgaatgaaaaaagc
cgaggtcagggtgtgagtcgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga

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