Pseudomonas viciae: EPZ47_24270
Help
Entry
EPZ47_24270 CDS
T07167
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPZ47_24270 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvk03019
]
EPZ47_24270 (rhlB)
Enzymes [BR:
pvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EPZ47_24270 (rhlB)
Messenger RNA biogenesis [BR:
pvk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EPZ47_24270 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QBZ91682
UniProt:
A0A4P7PMD3
LinkDB
All DBs
Position
5483260..5484735
Genome browser
AA seq
491 aa
AA seq
DB search
MTVLKALKKMFGKSEAEQLAPGASAPVNGQSRTDAQQPRRAAPAAQAKKEPVTPPAAQPA
TAPEPEKPRNEAPKPRRERAPKPPVVAWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQDL
GFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRA
LIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLL
DFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVM
NLAKQWTTDPSIVEIEALNVASENVEQHIYAVAGADKYKLLYNLVNDNGWERVMVFANRK
DEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGIS
HVINFTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIEALLGKKINCETPPT
HLLRPVERKRP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaagaagatgttcggtaaaagcgaggccgagcaactcgcg
cctggcgcaagcgcccctgtcaacggccagagccgtaccgatgcgcaacaaccgcgccgt
gctgcccctgctgcacaggcaaaaaaagagccggtgaccccacccgccgcccagcctgcc
acggcccctgaaccagaaaagccacgcaacgaagcccccaagccgcgccgcgaacgcgca
ccgaaaccgccggtcgtcgcctggaagctcgaggacttcgtcgtagaaccccaggaaggc
aagacccgcttccacgacttcaaactcgcccctgagctgatgcacgccatccaggacctg
ggcttcccgtactgcacgccgatccaggcccaggtgctgggcttcaccctcgccggcaaa
gacgccatcggccgcgcccagaccggtactggcaagaccgccgcgttcctgatttccatc
atcacccagttgctgcagaccccgccgcctaaagagcgctacatgggcgagccgcgggca
ctgatcatcgccccgacccgcgaactggtggtacagatcgccaaggacgccgccgacctg
accaagtacaccggcctgaacgtgatgacgttcgtgggcggcatggacttcgataaacag
ctcaagcacctcgaagcgcgccactgcgacatcctggtcgccacaccgggccgcctgctg
gacttcaaccagcgtggcgacgtgcacctggacatggtcgaggtgatggtgctggacgaa
gccgaccgcatgctcgacatgggtttcatcccgcaggtgcgccagatcattcgccagacc
ccaccgaaaagcgaacgccagaccctgctgttctccgccaccttcaccgaagatgtgatg
aacctggccaagcaatggaccaccgacccgtccatcgtcgagatcgaggcgctgaacgtc
gccagcgaaaacgtcgaacagcacatctatgcagtggccggtgccgacaagtacaagctg
ctctacaacctggtcaacgacaacggttgggagcgggtgatggtcttcgccaaccgcaag
gacgaagtacggcgcatcgaagaacgcctggtgcgcgatggcgtcaacgctgcgcaactg
tcgggcgacgtaccacagcataagcgcatcaagacgctggaaggctttcgcgaaggcaag
atccgcgtgctggtggccactgatgtggccggacgcggtatccacatcgacggcatcagc
cacgtgatcaacttcacgttgccggaagtgccggatgactatgtgcaccggattggccgt
accgggcgtgcaggcgctgctggcgtatcgatcagcttcgccggtgaggatgactcctat
cagttgccatcgatcgaagcgctgctagggaagaagatcaattgcgaaaccccaccgact
catctgcttcggccggttgagcgcaagcgcccttaa
DBGET
integrated database retrieval system
