Pseudomonas viciae: EPZ47_24810
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Entry
EPZ47_24810 CDS
T07167
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvk
Pseudomonas viciae
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_24810
Enzymes [BR:
pvk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EPZ47_24810
DNA repair and recombination proteins [BR:
pvk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EPZ47_24810
Prokaryotic type
EPZ47_24810
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBZ91785
UniProt:
A0A4P7PM54
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All DBs
Position
5599734..5601167
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AA seq
477 aa
AA seq
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MQLIWLRSDLRVHDNTALASAAARGPCVAVYLPSPAQWRAHDDAPCKIDFWLRNLASLGA
ALDALNIPLLIRPAQLWDQASQVLLRLCDELKISAVHVNEEYGLNETRRDAEVAQALRSQ
AIEFHSHLDQLLFKPGSVLTKTGNYFQVFSQFRKVCYNRLHFSLPSLVATPARQAPTGIA
SDPIPTQVEGFTLASEALRALWPAGEDEARRRLDTFVEQHLDDYQGERDFPARPGTSQIS
AYLVAGVVSPRQCLHAALQANQGEFESGSVGTVTWINELLWREFYKHILVGYPRVSRYRA
FRPETEALAWRKAPEELEAWKQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSASTGTDSAPWFRIFNPLSQSEKFDREGLFIK
RWLPELNDLDRQQVHSPNTQGGLFDRVDYPSPIVDLSESRARALSAFRDLAVRKGDD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgcgtgcacgacaacaccgccctggcgtcg
gccgcagcccgggggccatgcgtagcggtgtacttgccgagcccggcacaatggcgtgcc
catgacgatgcaccgtgcaagatcgatttctggttgcgcaacctcgcctcgctgggcgcc
gctctggacgcgctgaatattcccctgctgatccgccccgcgcagctctgggatcaggca
tcgcaggtgctcctcaggctgtgcgacgaactgaagatcagcgccgttcacgtcaacgaa
gaatacggcctgaacgaaacccgccgcgacgccgaggttgcccaggccttgaggagccag
gccatcgagtttcacagccaccttgaccagttgctgttcaagcccggcagcgtgctgacc
aagaccgggaattacttccaggtgttcagccagttccgcaaggtttgctacaaccgcttg
cacttctcactgccgagcctggtcgccacacccgcccggcaagcgcctaccggtatcgcc
agtgatccaataccgacgcaggtcgaagggttcaccctggccagtgaagcgctgcgtgca
ctttggcccgccggtgaagacgaggcccggcgacgcttggacacctttgtcgagcaacac
ctcgatgactaccagggtgaacgggattttccagcaagaccgggcaccagccagatttcg
gcttatctggtggccggcgtagtttcaccgcgccaatgcctgcacgcggcgctgcaagcc
aatcagggggaattcgagagcggaagtgtcggaacagtgacctggatcaatgaattgctc
tggcgcgagttctataaacatattctggtgggctatccacgcgtgtcgcgctatcgcgcg
tttcgcccggaaaccgaagcgttggcctggcgcaaggcccccgaggaactggaggcctgg
aagcaggcacgaactggcttgcccattattgatgcggccatgcgtcagttgctggaaacc
ggctggatgcacaaccgcttgcggatggtggtggcgatgtttcttaccaagaacctgctg
atcgactggcgcgagggtgagcgctttttcatgcaacacctgatcgacggcgacctggcc
gccaataatggcggttggcaatggagcgcctccaccggcacggactcggcgccctggttc
cgaatcttcaacccattgagccagtcggagaaattcgatcgcgagggtttgttcatcaaa
cgctggttgcctgaactgaacgatctcgacaggcaacaggtccatagcccaaatacccag
ggcggattgtttgatcgggtggattacccctctccgatcgtcgacttgagcgaatcccgg
gcgcgcgcactgtcagcattcagagatctcgcggtgcgaaaaggcgacgattga
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