Pseudomonas viciae: EPZ47_25620
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Entry
EPZ47_25620 CDS
T07167
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk00260
Glycine, serine and threonine metabolism
pvk00460
Cyanoamino acid metabolism
pvk00630
Glyoxylate and dicarboxylate metabolism
pvk00670
One carbon pool by folate
pvk00680
Methane metabolism
pvk01100
Metabolic pathways
pvk01110
Biosynthesis of secondary metabolites
pvk01120
Microbial metabolism in diverse environments
pvk01200
Carbon metabolism
pvk01230
Biosynthesis of amino acids
pvk01240
Biosynthesis of cofactors
pvk04981
Folate transport and metabolism
Module
pvk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EPZ47_25620
09102 Energy metabolism
00680 Methane metabolism
EPZ47_25620
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EPZ47_25620
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EPZ47_25620
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EPZ47_25620
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EPZ47_25620
Enzymes [BR:
pvk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EPZ47_25620
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QBZ91927
UniProt:
A0A4P7PLZ3
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Position
5770429..5771682
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AA seq
417 aa
AA seq
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MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEFVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQQQVVKNAKTMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cctgcggtgatggaagctcaaggctcggtactgaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggcggttgcgagttcgtcgacgtggtcgagcaattggccatcgac
cgtgccaaggaactgttcggtgccgactacgccaacgtccagccccacgccggttcccaa
gccaacgctgccgtgtacctggcgctgctgtcggccggtgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgctatccagtacggcatcgacggcaatggcctgatcgattacgacgaagtcgagcgt
ctggccctcgagcacaagccgaaaatgatcgtggccggtttctctgcctactcgcagatc
ctcgatttcccacgctttcgcgaaatcgccgacaaggtcggtgcctatctgttcgtggac
atggcccacgtagcaggcctggttgccgccggcgtctacccgaacccggtgccgttcgcc
gacgtggtcaccaccaccactcacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctgaactccgccgtattcccgggcgcccag
ggtggcccgctggaacacgtgatcgcagccaaggcgatctgcttcaaggaagccctgcaa
cctgagttcaaggcttaccagcaacaagtggtgaaaaacgccaagaccatggccggcgtg
ttcatcgagcgcggttttgacgtggtgtccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaagacatctccggcaaagacgctgacgcggcgctgggcaaggcgttc
atcaccgtgaacaagaactcggtgccaaacgacccacgctctccgttcgtcacctcgggc
ctgcgcttcggcaccccagccgtgaccacccgcggtttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggctgacctgaacaacgaagcagtgatcgacgcc
gttcgtgagaaggtcaaggctatctgcaagaagttgccggtatacggcgcttaa
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